PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc012146.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 311aa    MW: 34177 Da    PI: 4.7007
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc012146.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.61.5e-1887138156
                    AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                            + ++GVr++  +g+WvAeIr+p+   k kr +lg+f +a eAa a+++a+++++ge
  Cse_sc012146.1_g030.1  87 CSFRGVRQRT-WGKWVAEIREPN---KGKRLWLGTFASAVEAALAYDKAARAMYGE 138
                            579****999.**********93...25*************************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MTLLSQPSNT ACVPKGNSKK RTASKSMDKL TKRQKGNRAE APKIVAERLA KWIEYNKDGK  60
AITRKAPAKG SKKGCMKGKG GPENGRCSFR GVRQRTWGKW VAEIREPNKG KRLWLGTFAS  120
AVEAALAYDK AARAMYGEYA RINLPNYHAN TSLPCNAATS CYSTSTCSNS ECSEVQDSKS  180
GLDWCAPTET VCEASEVVNE SLDIKDAAGV SNDDGCYQAY SEDDMFYIDE LLGVTDQESE  240
FNNEAAGYPM PDNSWYENKQ DVSQNESIYM QQDACGVAPD FGFDFLDGGL EECNFSLEEF  300
GLSLDPTESV M
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05410.23e-38ERF family protein