PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc012146.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

ERF

Protein Properties

Length: 381aa MW: 41878.3 Da PI: 8.3755

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc012146.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	53.2	7.5e-17	87	137	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + ++GVr++ +g+WvAeIr+p ng kr +l +f +a +Aa a+++a+++++g Cse_sc012146.1_g010.1 87 CSFRGVRQRT-WGKWVAEIREP--NG-GKRLWLDTFESAVQAALAYDEAARAIYG 137 579**999.******9..33.5*********************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 381 aa Download sequence
MSQLSRPSNT TCVPKDNLKK RTASESMDKI RKRQKRNRAE APKILAETLA KWIESNKDGK 60 AITRKAPAKG SKKGCMKSKG GPENTRCSFR GVRQRTWGKW VAEIREPNGG KRLWLDTFES 120 AVQAALAYDE AARAIYGPSA RLNFPDYSAN TSCNAASSYD SATTCSYSES SEVQDSKSGL 180 DWFAPAQSVY AESEVVNETL VTGCCNDDGF CLDFPEDDMF DPDELLGVMD QKGECDNENK 240 TNFSQIESVR TILLQVINAA LNKQPFVTIS NQKLTVVETD ALYVKPFTTK VLMLGPGQKT 300 RVLIKADQSP GGYYIAARAY ASAQGTPFEN TTTTAILEYN TAKGSTSKPI MPLLPVYNDT 360 ATLTAFTTSF CSLEKPLFPL K

Sequence ? help Back to Top

Protein Sequence Length: 381 aa Download sequence

MSQLSRPSNT TCVPKDNLKK RTASESMDKI RKRQKRNRAE APKILAETLA KWIESNKDGK  60
AITRKAPAKG SKKGCMKSKG GPENTRCSFR GVRQRTWGKW VAEIREPNGG KRLWLDTFES  120
AVQAALAYDE AARAIYGPSA RLNFPDYSAN TSCNAASSYD SATTCSYSES SEVQDSKSGL  180
DWFAPAQSVY AESEVVNETL VTGCCNDDGF CLDFPEDDMF DPDELLGVMD QKGECDNENK  240
TNFSQIESVR TILLQVINAA LNKQPFVTIS NQKLTVVETD ALYVKPFTTK VLMLGPGQKT  300
RVLIKADQSP GGYYIAARAY ASAQGTPFEN TTTTAILEYN TAKGSTSKPI MPLLPVYNDT  360
ATLTAFTTSF CSLEKPLFPL K

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	32	38	KRQKRNR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G05410.2	2e-37	ERF family protein