PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc012039.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | NAC | ||||||||
Protein Properties | Length: 303aa MW: 34950.3 Da PI: 6.0017 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 160.7 | 5.8e-50 | 10 | 138 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 lppGfrF P+deelv++yL kk++++++ ++ e+d++++ePw+Lp ++k +++ewyfFs rd+ky+tg r+nrat+sgyWkatgk Cse_sc012039.1_g010.1 10 LPPGFRFYPSDEELVCHYLYKKIAREDVLK-GTLVEIDLHTCEPWQLPDTAKLNSSEWYFFSFRDRKYSTGFRTNRATTSGYWKATGK 96 79***********************99655.78***************88888999******************************** PP NAM 89 dkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrle 129 d++v++ +g vg++ktLvfyk+rap+g kt W+mhe+rle Cse_sc012039.1_g010.1 97 DRTVIDPiTGVIVGMRKTLVFYKNRAPNGIKTGWIMHEFRLE 138 ******999999***************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 303 aa Download sequence |
MGLRDIGATL PPGFRFYPSD EELVCHYLYK KIAREDVLKG TLVEIDLHTC EPWQLPDTAK 60 LNSSEWYFFS FRDRKYSTGF RTNRATTSGY WKATGKDRTV IDPITGVIVG MRKTLVFYKN 120 RAPNGIKTGW IMHEFRLENP SIPPKEDWVL CRVFYKAKGD NSNEHCPQDI HHNMIHNVTS 180 PNPDASSTLT TLCQAPPCVH HHPLSTNLSK QSPPLPIHHH PRQQNCFGLP PQEYNYQNLL 240 QLPHQDPILK ESIDQIIISS NNKCEDKYDF LYDLDLEDFV PSSNVQDMEI EDDDNDNGVV 300 FYE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G28530.1 | 2e-89 | NAC family protein |