PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc011987.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family GRAS
Protein Properties Length: 548aa    MW: 61344 Da    PI: 5.9293
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc011987.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS386.33.4e-1181735482374
                   GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsP 89 
                            +++L+++A+a+++g +e+a+al++ l++ +s +g+p+qRl ay++e+L+a+ ++s+s +yk+l++ e +    ++ ++++++++e++P
  Cse_sc011987.1_g020.1 173 KQTLIAIAHAIDDGVKEQATALMEALQNKVSVTGEPIQRLGAYMLEGLKAKQLSSGSLIYKKLSCYEPN---PKQLMTYMSVLYEICP 257
                            689*****************************************************************9...6888888999****** PP

                   GRAS  90 ilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvp 175
                            ++kf++  aN aI eav+ +++vH+iDf i qG QW+ L++ La+R++gpp+lR+Tgv++ +s+  +   l  +g+rLak Ae+ gvp
  Cse_sc011987.1_g020.1 258 YYKFAYTSANIAIKEAVQYDSHVHVIDFLIAQGSQWMQLIEDLAKRRGGPPRLRVTGVDDGDSSyaRGGGLDIVGQRLAKHAEKHGVP 345
                            ***********************************************************9888888999******************* PP

                   GRAS 176 fefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealey 263
                            fef++ +a + +++e  +Lrv+pgEalaVn+ ++lh+++desvs++++rd++++lvksl+Pk+v++ eqe+++n++sF +rf eal+y
  Cse_sc011987.1_g020.1 346 FEFHA-AAISGSEVEWGNLRVQPGEALAVNFPYMLHHMPDESVSTTNHRDRLIRLVKSLNPKIVTLLEQESNTNTSSFSKRFEEALDY 432
                            *****.8999****************************************************************************** PP

                   GRAS 264 ysalfdsleak......lpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk 345
                            y+a+f+s++ak      +pr++++ri+ E+ +++r+ vn+vace ++r+erhe l kW+ rl++aGF ++pls+++++ ++ +lr+++
  Cse_sc011987.1_g020.1 433 YTAMFESIDAKlpkniqMPRDDSQRISAEENCVARDMVNIVACEDTDRVERHEPLDKWKFRLQAAGFISLPLSYSVVTGVQEVLREFS 520
                            **********977777788888****************************************************************** PP

                   GRAS 346 sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                             + yr+ e++g+lvlgWk+rp+v++SaWr
  Cse_sc011987.1_g020.1 521 -ECYRLWEKEGALVLGWKNRPMVTCSAWR 548
                            .77*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 548 aa     Download sequence    
MQTSQQGRSS GAAIHRLYHQ PDHIEPFSLT GSHFQILNNN GYPNTVTVTT SHQETSVGSV  60
QTFNEQFFTL ESSPAVEYPV YNSPFVGSVS SNSRSPFSPQ ESSQSCLSNL HHSPDKSYGS  120
PFSNEVEQAL KEVEMELLGP ASDFEDGSIT SSFDNVNKYH KMLQMGISNL DVKQTLIAIA  180
HAIDDGVKEQ ATALMEALQN KVSVTGEPIQ RLGAYMLEGL KAKQLSSGSL IYKKLSCYEP  240
NPKQLMTYMS VLYEICPYYK FAYTSANIAI KEAVQYDSHV HVIDFLIAQG SQWMQLIEDL  300
AKRRGGPPRL RVTGVDDGDS SYARGGGLDI VGQRLAKHAE KHGVPFEFHA AAISGSEVEW  360
GNLRVQPGEA LAVNFPYMLH HMPDESVSTT NHRDRLIRLV KSLNPKIVTL LEQESNTNTS  420
SFSKRFEEAL DYYTAMFESI DAKLPKNIQM PRDDSQRISA EENCVARDMV NIVACEDTDR  480
VERHEPLDKW KFRLQAAGFI SLPLSYSVVT GVQEVLREFS ECYRLWEKEG ALVLGWKNRP  540
MVTCSAWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17230.11e-178GRAS family protein