PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc011931.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 866aa MW: 100021 Da PI: 8.4693

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc011931.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	60.5	5.1e-19	142	235	2	89
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.........tekerrtraetrtgCkaklkvkkekdgkwevtk 80 Y+ YA e+GF vr+ ++++ g +++++f Cskeg+++ + k+ ++ +r r+e rt+Ckak+ v ++ +k++v++ Cse_sc011931.1_g010.1 142 AYKGYAAEAGFIVRRGHQTND--GGIVINKEFLCSKEGTKKVKVKEfdslkdncdAKAVKRIRSEFRTNCKAKIYVVRS-GEKYRVKS 226 59************98877..99****************9***988888999**********999.9*** PP FAR1 81 leleHnHel 89 +++eHnH + Cse_sc011931.1_g010.1 227 FVEEHNHGF 235 *****87 PP

Sequence ? help Back to Top
Protein Sequence Length: 866 aa Download sequence
MQNSMNQRLR AKEQKCSIKE TKNNEMSYQF VIIITFVTPW RTDGSLPTVC LIHILLEASK 60 LVPYKYPLPS KAKGDSMRQN CASNEFVENE NLSADVNVEE NEEVNSPDFF TSTSMLIKPV 120 VVKTLVPVEG TLFDSVEETY NAYKGYAAEA GFIVRRGHQT NDGGIVINKE FLCSKEGTKK 180 VKVKEFDSLK DNCDAKAVKR IRSEFRTNCK AKIYVVRSGE KYRVKSFVEE HNHGFFIAED 240 RHLQKSNRSM SLAYQYFAIK ASNLDIGPCM SFNFIAELLG GYENVGSTKI DFKNMSRDIY 300 SYIGKYDAQM IIDNFSILKE RDENFTFDCL FWSDATSKRN YEAFGDVFSF DATYKTNMYN 360 MVFVPFTGVD NHQKCVIFAC GLLSKEDVVS YKWLLQAFLN THIKESYLVL TDQDPSMLIA 420 IPDMFKTAKH WLCMWHIMNK LPTKFKKRLC SLVWRESDEH VGFVKKWETL LDEFDLDKHK 480 WLNDMFNIKE RWIPAYFRDI LMSVHFLFRY ESALDQQRNN QRVLDNNSRI NRPSLKTNHL 540 VEQHAEEFYT LEAFYVVQAE IVASIESCTG SMKNLGYVKD IDKELFGEFK VEYDEETRSS 600 DKEWFGEFKV DYDEGTRLVN CSCLHFERRG LLCRHAFYTL RRYGINKIPK QYLLRRWKKE 660 AVVLPLLGSS FKANGSSGSC ISKIYSKVNA IINHCGYDEE KLGIFFEKLS IYESGLESST 720 VAQSSGNKED NISSMIGIPK PAAIDVFPPD IVSNKGGVTG ARYKPSNNDV RFKDPKECRK 780 ILRKCRICNI LTDHDYRNCP NNLDRKVLTA KKDIKKTKRN GKKVKRKSNN ANAEHGTKEF 840 NFEEIVSMVD MVNREVLEDG RKPSSS

Sequence ? help Back to Top

Protein Sequence Length: 866 aa Download sequence

MQNSMNQRLR AKEQKCSIKE TKNNEMSYQF VIIITFVTPW RTDGSLPTVC LIHILLEASK  60
LVPYKYPLPS KAKGDSMRQN CASNEFVENE NLSADVNVEE NEEVNSPDFF TSTSMLIKPV  120
VVKTLVPVEG TLFDSVEETY NAYKGYAAEA GFIVRRGHQT NDGGIVINKE FLCSKEGTKK  180
VKVKEFDSLK DNCDAKAVKR IRSEFRTNCK AKIYVVRSGE KYRVKSFVEE HNHGFFIAED  240
RHLQKSNRSM SLAYQYFAIK ASNLDIGPCM SFNFIAELLG GYENVGSTKI DFKNMSRDIY  300
SYIGKYDAQM IIDNFSILKE RDENFTFDCL FWSDATSKRN YEAFGDVFSF DATYKTNMYN  360
MVFVPFTGVD NHQKCVIFAC GLLSKEDVVS YKWLLQAFLN THIKESYLVL TDQDPSMLIA  420
IPDMFKTAKH WLCMWHIMNK LPTKFKKRLC SLVWRESDEH VGFVKKWETL LDEFDLDKHK  480
WLNDMFNIKE RWIPAYFRDI LMSVHFLFRY ESALDQQRNN QRVLDNNSRI NRPSLKTNHL  540
VEQHAEEFYT LEAFYVVQAE IVASIESCTG SMKNLGYVKD IDKELFGEFK VEYDEETRSS  600
DKEWFGEFKV DYDEGTRLVN CSCLHFERRG LLCRHAFYTL RRYGINKIPK QYLLRRWKKE  660
AVVLPLLGSS FKANGSSGSC ISKIYSKVNA IINHCGYDEE KLGIFFEKLS IYESGLESST  720
VAQSSGNKED NISSMIGIPK PAAIDVFPPD IVSNKGGVTG ARYKPSNNDV RFKDPKECRK  780
ILRKCRICNI LTDHDYRNCP NNLDRKVLTA KKDIKKTKRN GKKVKRKSNN ANAEHGTKEF  840
NFEEIVSMVD MVNREVLEDG RKPSSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-64	FAR1 family protein