PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc011734.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

bHLH

Protein Properties

Length: 310aa MW: 35016.5 Da PI: 7.8243

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc011734.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	27.6	5.2e-09	137	184	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L+ ++P + +k Ka +L + ++Y++sLq Cse_sc011734.1_g010.1 137 SHSLAERVRREKISERMKLLQAIVPGC----DKVTGKALMLDEIINYVQSLQ 184 8***********************9....555***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 310 aa Download sequence
MAAFSYNQHH SYLLDQNVFF SNLTTTNLPQ YHQLNDHAFH GHHHDQVSPD SSMSMVLDDQ 60 KVESGNDLLA KKRKDKQLSS VNNAQSKDTS KLKKQKKSND CQEEKKKKNA KKIVPSEEEG 120 AIGYIHVRAR RGQATDSHSL AERVRREKIS ERMKLLQAIV PGCDKVTGKA LMLDEIINYV 180 QSLQNQVEFL SMKLASVNPM LYDFGVDMDA FMLKPDESMS NMVLPIMPSA QQCNPNGAAA 240 TFVPANDNYH NHLPQMLNGS ATTNSLLFQQ SQMPNILSQG HGQHLWNMDE QRPKLDNHFA 300 ISNNNLSSFH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	71	97	KKRKDKQLSSVNNAQSKDTSKLKKQKK
2	71	111	KKRKDKQLSSVNNAQSKDTSKLKKQKKSNDCQEEKKKKNAK
3	91	108	KLKKQKKSNDCQEEKKKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50915.2	2e-52	bHLH family protein