PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc011589.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | HSF | ||||||||
Protein Properties | Length: 499aa MW: 57997.4 Da PI: 5.8894 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 91.6 | 8.9e-29 | 30 | 122 | 2 | 103 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkg 89 F+ kly++++d++++++isw ++g+sf+++de++f++++Lp+yF +s++ SF+ QLn YgF+k+ ++ eF++k+F+kg Cse_sc011589.1_g010.1 30 FVIKLYKMVSDKDTNSIISWGSSGTSFIIFDEHQFTSDILPSYFNTSRLDSFTTQLNNYGFNKIGGRH---------LEFEQKHFQKG 108 9***************************************************************9998.........78********* PP XXXXXXXXXXXXXX CS HSF_DNA-bind 90 kkellekikrkkse 103 k++ll+ ikr++++ Cse_sc011589.1_g010.1 109 KQHLLKAIKRRSKQ 122 ***********986 PP | |||||||
2 | HSF_DNA-bind | 93.1 | 3.1e-29 | 256 | 349 | 2 | 103 |
HHHHHHHHHCTGGGTTTSEES.SSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXX CS HSF_DNA-bind 2 Flkklyeiledeelkelisws.engnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkk 88 Fl+kly+++e++el++lisw+ + +sf+++d+++fa++vLp yF hsnf+SF QLn+Y+Fkkv+ e+ e+++++F Cse_sc011589.1_g010.1 256 FLHKLYNMVEKQELDDLISWKlPSRDSFIIWDTNRFATHVLPMYFNHSNFSSFNSQLNIYEFKKVNWER---------HEYANEWFLG 334 9********************9999*****************************************999.........57******** PP XXXXXXXXXXXXXXX CS HSF_DNA-bind 89 gkkellekikrkkse 103 g+++ll++i r+ ++ Cse_sc011589.1_g010.1 335 GREDLLQNITRRPKT 349 ***********9876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 499 aa Download sequence |
MALELQCFTS LHNFTLLAMD TDEFHGVVRF VIKLYKMVSD KDTNSIISWG SSGTSFIIFD 60 EHQFTSDILP SYFNTSRLDS FTTQLNNYGF NKIGGRHLEF EQKHFQKGKQ HLLKAIKRRS 120 KQSRVINNTP SLCVATNEFK ASFYKVCVGQ KQIFNRIQRF KLDMEKTLSE VQNITESLSH 180 NPIFTFSKDF GGKRKFGDLD PSIVFADIEQ DLETFCNQFE VPESGIDDFT TLSDWTHKVA 240 TGRGGRTGGG RRVPDFLHKL YNMVEKQELD DLISWKLPSR DSFIIWDTNR FATHVLPMYF 300 NHSNFSSFNS QLNIYEFKKV NWERHEYANE WFLGGREDLL QNITRRPKTQ QRMDHTMTCT 360 SAEMEMFTHR LKKIQQEQKS KITWISYSEE QMRSSVDGLK EMAVNMANIA NKLTLKSIEN 420 LEHVKKAKLV IEDDVIGNME GQSLEANELG EDQSALEENN NDVGIDFEAI DKYIQMDETW 480 IVQREITYYL SAPQELESD |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 113 | 119 | LKAIKRR |
2 | 243 | 251 | RGGRTGGGR |
3 | 244 | 250 | GGRTGGG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G54070.1 | 6e-24 | HSF family protein |