PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc011589.1_g010.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family HSF
Protein Properties Length: 499aa    MW: 57997.4 Da    PI: 5.8894
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc011589.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind91.68.9e-29301222103
                            HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXX CS
           HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkg 89 
                            F+ kly++++d++++++isw ++g+sf+++de++f++++Lp+yF +s++ SF+ QLn YgF+k+  ++          eF++k+F+kg
  Cse_sc011589.1_g010.1  30 FVIKLYKMVSDKDTNSIISWGSSGTSFIIFDEHQFTSDILPSYFNTSRLDSFTTQLNNYGFNKIGGRH---------LEFEQKHFQKG 108
                            9***************************************************************9998.........78********* PP

                            XXXXXXXXXXXXXX CS
           HSF_DNA-bind  90 kkellekikrkkse 103
                            k++ll+ ikr++++
  Cse_sc011589.1_g010.1 109 KQHLLKAIKRRSKQ 122
                            ***********986 PP

2HSF_DNA-bind93.13.1e-292563492103
                            HHHHHHHHHCTGGGTTTSEES.SSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXX CS
           HSF_DNA-bind   2 Flkklyeiledeelkelisws.engnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkk 88 
                            Fl+kly+++e++el++lisw+  + +sf+++d+++fa++vLp yF hsnf+SF  QLn+Y+Fkkv+ e+          e+++++F  
  Cse_sc011589.1_g010.1 256 FLHKLYNMVEKQELDDLISWKlPSRDSFIIWDTNRFATHVLPMYFNHSNFSSFNSQLNIYEFKKVNWER---------HEYANEWFLG 334
                            9********************9999*****************************************999.........57******** PP

                            XXXXXXXXXXXXXXX CS
           HSF_DNA-bind  89 gkkellekikrkkse 103
                            g+++ll++i r+ ++
  Cse_sc011589.1_g010.1 335 GREDLLQNITRRPKT 349
                            ***********9876 PP

Sequence ? help Back to Top
Protein Sequence    Length: 499 aa     Download sequence    
MALELQCFTS LHNFTLLAMD TDEFHGVVRF VIKLYKMVSD KDTNSIISWG SSGTSFIIFD  60
EHQFTSDILP SYFNTSRLDS FTTQLNNYGF NKIGGRHLEF EQKHFQKGKQ HLLKAIKRRS  120
KQSRVINNTP SLCVATNEFK ASFYKVCVGQ KQIFNRIQRF KLDMEKTLSE VQNITESLSH  180
NPIFTFSKDF GGKRKFGDLD PSIVFADIEQ DLETFCNQFE VPESGIDDFT TLSDWTHKVA  240
TGRGGRTGGG RRVPDFLHKL YNMVEKQELD DLISWKLPSR DSFIIWDTNR FATHVLPMYF  300
NHSNFSSFNS QLNIYEFKKV NWERHEYANE WFLGGREDLL QNITRRPKTQ QRMDHTMTCT  360
SAEMEMFTHR LKKIQQEQKS KITWISYSEE QMRSSVDGLK EMAVNMANIA NKLTLKSIEN  420
LEHVKKAKLV IEDDVIGNME GQSLEANELG EDQSALEENN NDVGIDFEAI DKYIQMDETW  480
IVQREITYYL SAPQELESD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1113119LKAIKRR
2243251RGGRTGGGR
3244250GGRTGGG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54070.16e-24HSF family protein