PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc011582.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 344aa MW: 40328.3 Da PI: 9.7708

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc011582.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	77	3.8e-24	32	120	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnH 87 +fYn+Y+ GF +rk + +++k+++ei++r++vC+k+g ++ ++k+ + ++r trtgC a+++v+++ +g w+v++++ eHnH Cse_sc011582.1_g020.1 32 DFYNDYGLFKGFGIRKPRVHRHKETNEIYRRELVCNKQGLKNMNDKRrLPDDVKRRCITRTGCMAMIQVTLK-QGLWVVDRFKAEHNH 118 6************************************99998888566788999************.9************ PP FAR1 88 el 89 +l Cse_sc011582.1_g020.1 119 NL 120 98 PP

Sequence ? help Back to Top
Protein Sequence Length: 344 aa Download sequence
MMLSVCMMKK RWSQKMYLIM GKTFESLEDF YDFYNDYGLF KGFGIRKPRV HRHKETNEIY 60 RRELVCNKQG LKNMNDKRRL PDDVKRRCIT RTGCMAMIQV TLKQGLWVVD RFKAEHNHNL 120 DLPSQVLKQR SHNIFHRSNE CKDVVNLLTK AGMKPAEITK IVNAFRGNEE DKLSRVQCSN 180 IVSNERKYNL GKECHGIIMH FQEKAETDQD FYFAMDLSKD GTLKSVFWAD GRSRSSYCNF 240 GDVVIFDTTY RTNKFSFPFA PFVGVNHHGQ SILDEQHRRK KTRVEMNTNF IVEKKATIQV 300 DVKRERYAYI LCTYVVVWHI TNLNHRVISD EGSADEGSAK MIGN

Sequence ? help Back to Top

Protein Sequence Length: 344 aa Download sequence

MMLSVCMMKK RWSQKMYLIM GKTFESLEDF YDFYNDYGLF KGFGIRKPRV HRHKETNEIY  60
RRELVCNKQG LKNMNDKRRL PDDVKRRCIT RTGCMAMIQV TLKQGLWVVD RFKAEHNHNL  120
DLPSQVLKQR SHNIFHRSNE CKDVVNLLTK AGMKPAEITK IVNAFRGNEE DKLSRVQCSN  180
IVSNERKYNL GKECHGIIMH FQEKAETDQD FYFAMDLSKD GTLKSVFWAD GRSRSSYCNF  240
GDVVIFDTTY RTNKFSFPFA PFVGVNHHGQ SILDEQHRRK KTRVEMNTNF IVEKKATIQV  300
DVKRERYAYI LCTYVVVWHI TNLNHRVISD EGSADEGSAK MIGN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-49	FAR1 family protein