PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc011366.1_g030.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | HSF | ||||||||
Protein Properties | Length: 189aa MW: 22299.3 Da PI: 9.9668 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 90.4 | 2.1e-28 | 6 | 97 | 2 | 102 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkg 89 F++k+y+i++d++++++isw +ng +f+v++ e+ak+v pkyF h+nf SF+RQLn YgF+++ d+ +eF+h +F+k Cse_sc011366.1_g030.1 6 FVSKTYDIVDDPKTDHIISWINNGYAFFVWKLIELAKHVFPKYFTHTNFCSFIRQLNEYGFSRMGDDG---------TEFRHYNFRKY 84 9****************************************************************999.........68********* PP XXXXXXXXXXXXX CS HSF_DNA-bind 90 kkellekikrkks 102 +k+l +ikr+k+ Cse_sc011366.1_g030.1 85 EKSLHMQIKRRKK 97 **********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 189 aa Download sequence |
MVRPNFVSKT YDIVDDPKTD HIISWINNGY AFFVWKLIEL AKHVFPKYFT HTNFCSFIRQ 60 LNEYGFSRMG DDGTEFRHYN FRKYEKSLHM QIKRRKKFDI ERNRRPNNYI ARTTPPTSGN 120 PSEELEGPSN TSSISTDILI ALKRMRTKVE LSAKSIYDAD MSFSYKIFSE EIQRYIFPGS 180 FSQRGMNGV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G02990.1 | 1e-26 | HSF family protein |