PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc011327.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

NAC

Protein Properties

Length: 772aa MW: 86827.3 Da PI: 6.5835

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc011327.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	181.1	2.9e-56	6	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkat 86 lppGfrFhPtdeelv +yLkkk++g+++el evi+evd+yk+ePwdLp k + +++ ewyfFs+rd+ky++g+r+nratk gyWkat Cse_sc011327.1_g030.1 6 LPPGFRFHPTDEELVAYYLKKKINGHEIEL-EVIPEVDLYKCEPWDLPgKsLLPSKDLEWYFFSPRDRKYPNGSRTNRATKGGYWKAT 92 79**************************.99***********6434555777************************** PP NAM 87 gkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 gkd++v s +++++g+kktLv+y+grap+g++tdWvmheyrl Cse_sc011327.1_g030.1 93 GKDRKVNS-QSRAMGMKKTLVYYRGRAPHGSRTDWVMHEYRL 133 ****.9999*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 772 aa Download sequence
MAPVSLPPGF RFHPTDEELV AYYLKKKING HEIELEVIPE VDLYKCEPWD LPGKSLLPSK 60 DLEWYFFSPR DRKYPNGSRT NRATKGGYWK ATGKDRKVNS QSRAMGMKKT LVYYRGRAPH 120 GSRTDWVMHE YRLDERECET ASGLQLQDVY SLCLIFKKSL NPPKTTTTGD QYPTLASNHS 180 SYSDLYSEGA RGVGDAQICN YQTPPMPSCS STILQGSHNL VSDANDVKWT QYLSEDAFTF 240 PNPSFPNHIL NPYSPKVNMA MECARLQHTL YLPPLQVQDF QPDGVSSYFG LKTIPQSSNG 300 QPIGSQKDIL HEILALAQVS QDHINQNTWG GSYAGIDNDF SFLPNDNNQM QGAGPSGSTG 360 DHQNMRPIEI GGIDDQVKTD RIAENLRWIG MSKKDLEMAF LDDKSIPVEY ISSFQREDHE 420 VQGEYIHNND STSDQFTLGF LNDDMNNFSD NFLQVDAINH LTTFVPIKLD VDEMHYSSWV 480 YYFSHLCHGY GILDHLVDPP AFSSSTPPPP PTKDAKWLKV DFIIRSWIFS TLASNLQKRL 540 VVLNPKFSKE AWVCLEGILQ DNKCPRAIAL KAELRNLKLE ELTIDAYFQK IESIALVLNG 600 LGSPLSNDDI VTFALEGLPK YDVISTVIAS REPFPDLKKV RSLLTTQEMR MKSKVQDSLV 660 DATSASPMVL LANNNTWCPS NPLEKVNKPC FLFAKGHFRF GKACRYLHNG INGKSTIIPR 720 GSGYVDMDTF QQLLAKLGFT SSQNKPSTTQ PVAYHVSHPK IPVLQWNGML GA

Sequence ? help Back to Top

Protein Sequence Length: 772 aa Download sequence

MAPVSLPPGF RFHPTDEELV AYYLKKKING HEIELEVIPE VDLYKCEPWD LPGKSLLPSK  60
DLEWYFFSPR DRKYPNGSRT NRATKGGYWK ATGKDRKVNS QSRAMGMKKT LVYYRGRAPH  120
GSRTDWVMHE YRLDERECET ASGLQLQDVY SLCLIFKKSL NPPKTTTTGD QYPTLASNHS  180
SYSDLYSEGA RGVGDAQICN YQTPPMPSCS STILQGSHNL VSDANDVKWT QYLSEDAFTF  240
PNPSFPNHIL NPYSPKVNMA MECARLQHTL YLPPLQVQDF QPDGVSSYFG LKTIPQSSNG  300
QPIGSQKDIL HEILALAQVS QDHINQNTWG GSYAGIDNDF SFLPNDNNQM QGAGPSGSTG  360
DHQNMRPIEI GGIDDQVKTD RIAENLRWIG MSKKDLEMAF LDDKSIPVEY ISSFQREDHE  420
VQGEYIHNND STSDQFTLGF LNDDMNNFSD NFLQVDAINH LTTFVPIKLD VDEMHYSSWV  480
YYFSHLCHGY GILDHLVDPP AFSSSTPPPP PTKDAKWLKV DFIIRSWIFS TLASNLQKRL  540
VVLNPKFSKE AWVCLEGILQ DNKCPRAIAL KAELRNLKLE ELTIDAYFQK IESIALVLNG  600
LGSPLSNDDI VTFALEGLPK YDVISTVIAS REPFPDLKKV RSLLTTQEMR MKSKVQDSLV  660
DATSASPMVL LANNNTWCPS NPLEKVNKPC FLFAKGHFRF GKACRYLHNG INGKSTIIPR  720
GSGYVDMDTF QQLLAKLGFT SSQNKPSTTQ PVAYHVSHPK IPVLQWNGML GA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65910.1	1e-122	NAC family protein