PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc011304.1_g040.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 259aa    MW: 29248.1 Da    PI: 5.7807
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc011304.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.22.4e-1996146155
                    AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                            ++y+GVr+++ +g+++AeIrdp++   r r +lg+f taeeAa  +++a+++l+g
  Cse_sc011304.1_g040.1  96 KKYRGVRRRP-WGKYAAEIRDPVK---RVRLWLGTFNTAEEAAMVYDQAALQLRG 146
                            59********.**********755...5*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MEDTLVKKTT HKKNTFKLTT NSPTPKLIRI SLTDTYATDS DNDDDETTNI TCHKRVKKFI  60
HEVTIQPEYP KPSVVVDKMK KTERIPLKAL TNSNNKKYRG VRRRPWGKYA AEIRDPVKRV  120
RLWLGTFNTA EEAAMVYDQA ALQLRGPHAL TNFVVPTSSP ELKPEPVVSC SGSGFNSGDE  180
ISSSSGNKMM SPKSVLPDLG DEVGCLEIFR PFDGDFLKGD LFEFGKLDEF NFDLMTSPST  240
VCERFDPFED FNTDDFLCD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.11e-36ERF family protein