PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc011266.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

DBB

Protein Properties

Length: 311aa MW: 34024.3 Da PI: 7.4212

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc011266.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	20.1	1.3e-06	4	35	5	36
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg 36 +C+ +++ e++ +C ++ lC C H+ Cse_sc011266.1_g030.1 4 ICDVCNQDEASVYCSADDAALCCACDHRVHHA 35 8****99****************99743 PP
2	zf-B_box	29.1	2.1e-09	55	93	3	39
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg..Htv 39 ++C+ ++ek+ lfC++++ lC+dC +++Hk Ht+ Cse_sc011266.1_g030.1 55 SPICDICQEKKGLLFCQQDRAILCKDCDVAIHKVneHTM 93 689*****************************6577765 PP

Sequence ? help Back to Top
Protein Sequence Length: 311 aa Download sequence
MRIICDVCNQ DEASVYCSAD DAALCCACDH RVHHANIVAG KHPRFSLIQP SPKDSPICDI 60 CQEKKGLLFC QQDRAILCKD CDVAIHKVNE HTMNHSRFLH TGVKLSQATL LPTIEKSVVP 120 DQKPKSGGQE RVSAPILNQK SQKTATSIIS TVPKSSNGSN NSSSISEYLI ETIPGWHVED 180 FLDSPPTFTK GCDDDLSVFW DEELLKGSMN GSFSPETMGT WVPQAPPPAA RPPSLVPSQA 240 RVYNSYQSQN YSNTGSGSQM INGSSFVFAA SSLNNKITKS SSKHRIDDGN CFTVPQMSPQ 300 AMTFKRSRTL Q

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75540.1	8e-50	DBB family protein