PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc011262.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family GATA
Protein Properties Length: 333aa    MW: 37411.6 Da    PI: 9.0074
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc011262.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA60.62e-19189222134
                   GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                            Cs C+ttkTplWR+gp+g+k+LCnaCG+++rk +
  Cse_sc011262.1_g020.1 189 CSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKAR 222
                            *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    
MTPIYFTSPS NDHYIEHNFF SPSDQRTEHQ FLSPKSQAST SSDSPTCHLF FNPITTHDQD  60
ESFNRDTHPT QNEDDNFGSQ AYGDHRVENK DEGARSNGGL KFSLWKNESY DHMNDGNQVK  120
WMSSKMRVML KMKKTDPLKL NTLRSTTTEL ELEDHQDHKE SLSSPMEETT NSSSINSTSS  180
NNNIQIRVCS DCNTTKTPLW RSGPRGPKSL CNACGIRQRK ARKAMAAAAA QAAGETNKSV  240
SSDKPTSLKA TKVLHKDHKK TNIGHVTKYK KKQYSNQIST NLSPSSSPPT RKNCVEEFLV  300
RLRKNLAIHG VFPQDEKEAA ILLMALSCGY AHQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26150.15e-24GATA family protein