PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc011256.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 280aa    MW: 32949 Da    PI: 8.1949
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc011256.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR135.43.6e-1159150190
                   FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkek.dgkwevtklele 84 
                            ++Y eY +++ Fs+rks++k++  ng it++   C+k g ++++  k    +k+ +++++++   k + +++k++    ++++++ ++
  Cse_sc011256.1_g030.1  59 NMYLEYTQKARFSIRKSTTKRK--NGDITHKYILCNKAGLPRKTVVKdtlVDKKLNENNQKEDAKKTRENLQKNSwYPAYRLYEFTEN 144
                            58**************998877..999*************99998887875555566666666667777888888899********** PP

                   FAR1  85 HnHela 90 
                            HnH+l 
  Cse_sc011256.1_g030.1 145 HNHPLL 150
                            ****95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
YRLTTLQFIC VDRSDFEGSE SDDEVVPTPN GHKYWIPDVS FEEKPTEDDV FDSFDEAYNM  60
YLEYTQKARF SIRKSTTKRK NGDITHKYIL CNKAGLPRKT VVKDTLVDKK LNENNQKEDA  120
KKTRENLQKN SWYPAYRLYE FTENHNHPLL DENNMDLSTA KCKLDFSDKL LIHRASLSNI  180
GPTKAHRLRV AFMGGYDKVR GKPSDWKNFQ RSLNKYIGPR DAQMLVDKMN DRKKHVPNFT  240
FEYHCVNDVL DRMFWADETM KCNYHAFGDV VSFDATYRTN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10240.11e-13FAR1 family protein