PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc011146.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MYB

Protein Properties

Length: 345aa MW: 39694.9 Da PI: 7.2374

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc011146.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.5	2.3e-16	92	137	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l+++v+++G+ +W++Ia+++ gR++k+c++rw++ Cse_sc011146.1_g010.1 92 RGHWKPVEDAKLKELVALYGPQNWNLIAEKLE-GRSGKSCRLRWFNQ 137 899***************************.*********996 PP
2	Myb_DNA-binding	53.4	5.8e-17	144	187	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 ++++++eE+e+l+ a++++G++ W++ ar ++ gRt++ +k++w+ Cse_sc011146.1_g010.1 144 KKAFSEEEEERLIMAHRLYGNK-WSLMARLFP-GRTDNAVKNHWHV 187 679*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 345 aa Download sequence
MFSDSFGSLS IYNDNPNSQK MYTHYHNYHH HHNLASASSS SSSLSNDHSI LRNFHENDQD 60 HGHDNDEGIN LTLKSNIDSH DRLCGQLRTS ARGHWKPVED AKLKELVALY GPQNWNLIAE 120 KLEGRSGKSC RLRWFNQLDP RINKKAFSEE EEERLIMAHR LYGNKWSLMA RLFPGRTDNA 180 VKNHWHVIMA RKYREQSNAY KRSKNMMSSE SQSQTSATQP PPPPEVMFGT SCDQLPPWRF 240 TSGPKNNIEM MMDMFNNNHN NVISYENHSS SSSSSPNECW MMHTSNPISF HHPQQLLTQA 300 MNHNYYNQYS LGPPPPEDRL VDQNYSTANN NLSPQFIDFL GVGAI

Sequence ? help Back to Top

Protein Sequence Length: 345 aa Download sequence

MFSDSFGSLS IYNDNPNSQK MYTHYHNYHH HHNLASASSS SSSLSNDHSI LRNFHENDQD  60
HGHDNDEGIN LTLKSNIDSH DRLCGQLRTS ARGHWKPVED AKLKELVALY GPQNWNLIAE  120
KLEGRSGKSC RLRWFNQLDP RINKKAFSEE EEERLIMAHR LYGNKWSLMA RLFPGRTDNA  180
VKNHWHVIMA RKYREQSNAY KRSKNMMSSE SQSQTSATQP PPPPEVMFGT SCDQLPPWRF  240
TSGPKNNIEM MMDMFNNNHN NVISYENHSS SSSSSPNECW MMHTSNPISF HHPQQLLTQA  300
MNHNYYNQYS LGPPPPEDRL VDQNYSTANN NLSPQFIDFL GVGAI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69560.1	7e-72	MYB family protein