PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc011136.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 571aa MW: 66078.5 Da PI: 9.2422

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc011136.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	23.9	1.3e-07	54	134	7	89
FAR1 7 AkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 A+++GF ++k ++k+ g ++ ++ Cs++g ++ e + ++ +r++++t+++C +l k k ++ w ++ HnH + Cse_sc011136.1_g020.1 54 AESIGFLIVKGRTKTD--RGYKYSIELLCSRNGISACEGLE-DELERQTSTTKINCPFRLLAKFIKrRNGWILKVKCPRHNHVF 134 899******98888..6667************999.888899999********99988999999999***87 PP

Sequence ? help Back to Top
Protein Sequence Length: 571 aa Download sequence
MITFSRSIFW YMGVGGAWPE RRRKDAGFRE REERDIISVF DNEVTLTDWV QSTAESIGFL 60 IVKGRTKTDR GYKYSIELLC SRNGISACEG LEDELERQTS TTKINCPFRL LAKFIKRRNG 120 WILKVKCPRH NHVFVDSFHG FSQAMRLKES EFVLVKQLTE YRVAPRIILS TIKESDPNNV 180 SGIKTVYNAQ DKIRRANRGD LTPIRLLLIT TACLCRTLPI NIAALARQQH VELTHMHVVI 240 SCGLPIPLYF VDNFWRTLSV PWPVVRNTQE PDEPEYPQEP QGPEEPEYFS CQDDLQKFQS 300 VFTKASSFVK KNMLNRLRGI YAPESVSAQQ PSVKESNRGH PSAKDNKSKS KPNIPDLNEE 360 PPTRHRRSYT KPKKVPDLNE ESARHSSYVG EPYNVPDLNE RPNEGPSEGD LRHHLYVRDD 420 FSEYCMAEIP PLFRRWILGI FNVEGDGNCG YRALAVGLGH QEQMWPRIRA IAREEVDSNE 480 EVYRQLWGDY FTSTCNSMNW FNDAAPRRYW MTMLQLLTVL FQGLKTMGVD TSCGRKYFNK 540 RTLVRPLLQR SAQTAKLKIK RSTCYWLKTI C

Sequence ? help Back to Top

Protein Sequence Length: 571 aa Download sequence

MITFSRSIFW YMGVGGAWPE RRRKDAGFRE REERDIISVF DNEVTLTDWV QSTAESIGFL  60
IVKGRTKTDR GYKYSIELLC SRNGISACEG LEDELERQTS TTKINCPFRL LAKFIKRRNG  120
WILKVKCPRH NHVFVDSFHG FSQAMRLKES EFVLVKQLTE YRVAPRIILS TIKESDPNNV  180
SGIKTVYNAQ DKIRRANRGD LTPIRLLLIT TACLCRTLPI NIAALARQQH VELTHMHVVI  240
SCGLPIPLYF VDNFWRTLSV PWPVVRNTQE PDEPEYPQEP QGPEEPEYFS CQDDLQKFQS  300
VFTKASSFVK KNMLNRLRGI YAPESVSAQQ PSVKESNRGH PSAKDNKSKS KPNIPDLNEE  360
PPTRHRRSYT KPKKVPDLNE ESARHSSYVG EPYNVPDLNE RPNEGPSEGD LRHHLYVRDD  420
FSEYCMAEIP PLFRRWILGI FNVEGDGNCG YRALAVGLGH QEQMWPRIRA IAREEVDSNE  480
EVYRQLWGDY FTSTCNSMNW FNDAAPRRYW MTMLQLLTVL FQGLKTMGVD TSCGRKYFNK  540
RTLVRPLLQR SAQTAKLKIK RSTCYWLKTI C