PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc011095.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family GRAS
Protein Properties Length: 735aa    MW: 81651.8 Da    PI: 6.4377
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc011095.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS3466e-1063476981354
                   GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevs 88 
                            l++lL  cA+av+++d++ a+ lL++++e+asp+gd mqRla+yf  +L+ar+a+s++e+yka+ +++ +    +++l+a++l+  ++
  Cse_sc011095.1_g020.1 347 LRTLLSLCAQAVAANDQRGANDLLKQIREHASPSGDGMQRLAHYFSAGLEARMAGSGTEIYKACLSKPIA---AVDVLKAYHLYLSCC 431
                            5789999*********************************************************999999...9************** PP

                   GRAS  89 PilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgv 174
                            P++k+s+++ N++Il  ++ ++++Hi+Df+i +G+QWp++++ L++Rp+gpp+lRiTg++ p +g   ++++eetg+rLa++Ae+++v
  Cse_sc011095.1_g020.1 432 PFVKISNFLSNKTILHTAKDKKKLHIVDFGILYGFQWPCFIHRLSKRPGGPPELRITGIDFPCPGfkPAQRVEETGRRLANYAETFNV 519
                            **************************************************************99999********************* PP

                   GRAS 175 pfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerfleale 262
                            pf+f++ +a+++e+++l++L+++++E+l+Vn++++ + llde+v ++s+r++vL+l+++++P++++    + ++n++ F +rf eal 
  Cse_sc011095.1_g020.1 520 PFKFKA-IAQKWETVTLDDLELERDEMLIVNCAYRFKCLLDETVIVDSPRSKVLSLIRKMNPDMFIQGVINGSYNAPFFITRFREALF 606
                            ******.7******************************************************************************** PP

                   GRAS 263 yysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyr 350
                            y+s++fd++ea++ r++ er+ +E+ l g+e++nv+aceg er+er et+++W+ r  +aGF+++pl++++ k ak   + ++ + + 
  Cse_sc011095.1_g020.1 607 YFSSMFDMIEANATRDTPERMLLEKNLWGQEAMNVIACEGGERIERPETYKQWQVRNLRAGFRQLPLDQEILKMAKDRAKACYHRDFG 694
                            ***********************************************************************************98899 PP

                   GRAS 351 veee 354
                            ++e+
  Cse_sc011095.1_g020.1 695 IDED 698
                            9886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 735 aa     Download sequence    
MDGVWKADYG VMNLNNIKFN GSPAVLSDPQ FLNAMNLNET VLQRNVNAAP DQSVGGYSTS  60
SSVNPRGDVN EDFELSDVVF KYINQMLMEE NIEEKTCMLQ EPAALEAAEK SFYDVLMVNE  120
PPHPTVPLYA NDELTVGDYS CFGNGNGNGF GSGAGLSCDV GDQESLLVPN VPVKFDSQSR  180
PQSSYSSSGN SCVADCLADS PVSIQSMSDM LGGSTSAMQF QKGVVESNRF PLSRDKTLYQ  240
LGTVDPDTMV FKAEKKYEMN AIAEETRGRK NPYSKDFVGD GRVTKQSAVY TEPTVRSKMF  300
DDVLLCSGAH NLPQGNFVPN GAARVQQKSN VSKGRGKRGA KKDVVDLRTL LSLCAQAVAA  360
NDQRGANDLL KQIREHASPS GDGMQRLAHY FSAGLEARMA GSGTEIYKAC LSKPIAAVDV  420
LKAYHLYLSC CPFVKISNFL SNKTILHTAK DKKKLHIVDF GILYGFQWPC FIHRLSKRPG  480
GPPELRITGI DFPCPGFKPA QRVEETGRRL ANYAETFNVP FKFKAIAQKW ETVTLDDLEL  540
ERDEMLIVNC AYRFKCLLDE TVIVDSPRSK VLSLIRKMNP DMFIQGVING SYNAPFFITR  600
FREALFYFSS MFDMIEANAT RDTPERMLLE KNLWGQEAMN VIACEGGERI ERPETYKQWQ  660
VRNLRAGFRQ LPLDQEILKM AKDRAKACYH RDFGIDEDGL VRRKLAAPEC PTGNTEFVGT  720
LTNEASRFVP QGQPS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.11e-172GRAS family protein