PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc011083.1_g020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | MYB | ||||||||
Protein Properties | Length: 106aa MW: 12895.7 Da PI: 11.056 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 34.1 | 6.4e-11 | 2 | 33 | 16 | 48 |
HHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 16 vkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 v+++G + W+ Ia+++ gR +kqc++rw+++l Cse_sc011083.1_g020.1 2 VEKYGVRKWSYIAQMLK-GRIGKQCRERWHNHL 33 99**************9.*************97 PP | |||||||
2 | Myb_DNA-binding | 53.4 | 5.9e-17 | 40 | 81 | 2 | 45 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 + WT+eEd +l+ a+++ G++ W+ Ia++++ gRt+++ k++w+ Cse_sc011083.1_g020.1 40 DFWTEEEDRILIAAHAEVGNK-WSEIANKLP-GRTENSTKNHWN 81 67*******************.*********.***********8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 106 aa Download sequence |
MVEKYGVRKW SYIAQMLKGR IGKQCRERWH NHLRPDIKKD FWTEEEDRIL IAAHAEVGNK 60 WSEIANKLPG RTENSTKNHW NATKRRQFTR RKRRSKWPRP SPIEDE |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 84 | 93 | KRRQFTRRKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18770.1 | 1e-45 | MYB family protein |