PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc011020.1_g050.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | WRKY | ||||||||
Protein Properties | Length: 325aa MW: 36531.2 Da PI: 6.6519 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 104.3 | 6.6e-33 | 177 | 234 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK vk+s++prsYYrCt+++C+vkk+vers +dp++v++tYeg+Hnh+ Cse_sc011020.1_g050.1 177 EDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCTVKKRVERSYQDPSTVITTYEGQHNHH 234 8********************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 325 aa Download sequence |
MSQDQRDLYY HDPFHDDQRT SETLFSFFGP NSGIRDESSP PNHQRFQDYM GLTHFFNNGS 60 SDYNSPATTF GYTSSSSQQV FALQDDQKPI MDHGNLVGAS EMTPVTPNSS SILSSSTEAP 120 DDEPELNEGK KENQQKGVLE DGGESSKKVA KQKKKDEKKP REPRFAFMTK SDIDHLEDGY 180 RWRKYGQKAV KNSPYPRSYY RCTTQKCTVK KRVERSYQDP STVITTYEGQ HNHHLPATLR 240 GNVGGMLYPQ SMLAAQSAMM ASGGSSFSHE FLSQIPHGFY NPNGGASSGS IYQQTSLAPM 300 HQQLQIPDYG LLQDMVPSMT FKQEP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G29860.1 | 2e-52 | WRKY family protein |