PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc010933.1_g030.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | bHLH | ||||||||
Protein Properties | Length: 259aa MW: 29524.7 Da PI: 8.6999 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 14.9 | 4.7e-05 | 108 | 148 | 10 | 55 |
HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ++ R+ + ++ L+++lP++ kK++ + Le++ +YIk Lq Cse_sc010933.1_g030.1 108 QQKRRTLSEKTRALQKILPWD-----KKMDMGTLLEETYKYIKFLQ 148 5568889999999*******9.....9******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 259 aa Download sequence |
MDLHFQSLLT GKYPTHHHTP ATSDESSTTP PPQQPPHHHH LLKKPKLEHS TNYTSYLNSI 60 NPYHHPMIMF HQLPDLTSFE NLNYPPSLPP FLSQPRKTPT PSSREKQQQK RRTLSEKTRA 120 LQKILPWDKK MDMGTLLEET YKYIKFLQAQ VKVLELMPVD SSTTGSNFGS NEDDNVSVAN 180 VGYGTYGYYG NVYGGLERLN RQQLLEVIVN SPAAQAILCS RGCCVYSTEQ LVMFKDLAEK 240 NYASMLGILL MLKAKDEMR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G22100.1 | 4e-27 | bHLH family protein |