PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc010872.1_g020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | B3 | ||||||||
Protein Properties | Length: 259aa MW: 29134.9 Da PI: 5.3337 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 51.8 | 1.5e-16 | 137 | 232 | 6 | 99 |
..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE-SS CS B3 6 tpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvFkldgr 87 + ++lk++r+++p+++a +h +g +e + l + d++g++W+v+++ + + ++ yv+t G k+F +++L++gD+v F++ r Cse_sc010872.1_g020.1 137 ATDSNLKTCRMRIPRQYAMDHfpkvNG--TEVVPLNIIDTDGKEWSVNFRCWPHYNKatYVMT-GLKDFYVSKNLQTGDTVAFYR--R 219 46678899*************995543..455669999***********98777776657777.********************4..3 PP .SEE..EEEEE-S CS B3 88 .sefelvvkvfrk 99 ++++ v+ ++++ Cse_sc010872.1_g020.1 220 dTDGKIVMELRKH 232 3899888888876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 259 aa Download sequence |
MGDSLKIKPC FNCKDSSSVK LMNGWKDSTG EYVQLCYNCC SIYKAGQFCE MFHSDEDGWR 60 DCESCKQLIH CGCIVSLSDY MMHDSGGITC NECSDTSSLL GRDCSNDESH STDVTDLAND 120 TDLKSVLTPL FEKVVSATDS NLKTCRMRIP RQYAMDHFPK VNGTEVVPLN IIDTDGKEWS 180 VNFRCWPHYN KATYVMTGLK DFYVSKNLQT GDTVAFYRRD TDGKIVMELR KHSAQDLQAS 240 TDVGKQISIL GPVYTYVVL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G21550.1 | 2e-24 | B3 family protein |