PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc010778.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MYB

Protein Properties

Length: 377aa MW: 43776 Da PI: 5.2388

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc010778.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.5	1.3e-17	160	206	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd +l++ v+++G + W+ Ia+++ gR +kqc++rw+++l Cse_sc010778.1_g020.1 160 KGQWTQEEDRILKEMVEKYGVRKWSYIAQMLK-GRIGKQCRERWHNHL 206 799**************************9.***********97 PP
2	Myb_DNA-binding	53	7.8e-17	213	254	2	45
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 + WT+eEd++l+ a+++ G++ W+ Ia++++ gRt+++ k++w+ Cse_sc010778.1_g020.1 213 DFWTEEEDQILIAAHAEVGNK-WSEIAKKLP-GRTENSTKNHWN 254 67*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 377 aa Download sequence
MDLFSENHFK PELEHEFEFE DDFTMDTKGV FQDLHQLDNL SRTSSSFDPD YTTHVEGYDP 60 FGPLPYGIGS NDLDLNEFKP LQHVNDGGMA VNYVTQNRSF MACPQADFSA RLGIMECPIQ 120 NPKPMSFFAP DEGSCITADN GLKKGNRKPD KWTKNTNSSK GQWTQEEDRI LKEMVEKYGV 180 RKWSYIAQML KGRIGKQCRE RWHNHLRPDI KKDFWTEEED QILIAAHAEV GNKWSEIAKK 240 LPGRTENSTK NHWNATKRRQ FTRRKCRSKW PRPSPILQNY IKSLNLPRGR MNNKSNNDHT 300 LAVVKPLSSV TEQEDFDFSD VPEFAMDEKL LEWDDNIESL LDDMPCNNRG GDEVDSYLQG 360 EVKKEMDLME MISQVNF

Sequence ? help Back to Top

Protein Sequence Length: 377 aa Download sequence

MDLFSENHFK PELEHEFEFE DDFTMDTKGV FQDLHQLDNL SRTSSSFDPD YTTHVEGYDP  60
FGPLPYGIGS NDLDLNEFKP LQHVNDGGMA VNYVTQNRSF MACPQADFSA RLGIMECPIQ  120
NPKPMSFFAP DEGSCITADN GLKKGNRKPD KWTKNTNSSK GQWTQEEDRI LKEMVEKYGV  180
RKWSYIAQML KGRIGKQCRE RWHNHLRPDI KKDFWTEEED QILIAAHAEV GNKWSEIAKK  240
LPGRTENSTK NHWNATKRRQ FTRRKCRSKW PRPSPILQNY IKSLNLPRGR MNNKSNNDHT  300
LAVVKPLSSV TEQEDFDFSD VPEFAMDEKL LEWDDNIESL LDDMPCNNRG GDEVDSYLQG  360
EVKKEMDLME MISQVNF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18770.1	4e-82	MYB family protein