PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc010685.1_g040.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 800aa MW: 91733.5 Da PI: 5.9655

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc010685.1_g040.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	101.1	1.1e-31	84	175	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnH 87 fYn+YA++vGFs+r+s+s++s+++g i++r fvC keg+r+ ++k+ +++ +r+r++tr+gCka++ vk +++gkw v+ +++eHnH Cse_sc010685.1_g040.1 84 FYNSYARRVGFSTRVSSSRRSRKDGAIIQRSFVCAKEGFRNLNEKRtkDREIKRPRTVTRVGCKASMSVKIQHSGKWLVSAFVKEHNH 171 9*************************************998888545677889******************************* PP FAR1 88 elap 91 +l+p Cse_sc010685.1_g040.1 172 DLVP 175 *986 PP

Sequence ? help Back to Top
Protein Sequence Length: 800 aa Download sequence
MENEVIEFDL GSGRDDDVDN DDDDDDEIHS PTLGVGVNGF FLDHTNTNSS PSYYYHHTST 60 SSSGSDLEPC EGMEFESEEA AKAFYNSYAR RVGFSTRVSS SRRSRKDGAI IQRSFVCAKE 120 GFRNLNEKRT KDREIKRPRT VTRVGCKASM SVKIQHSGKW LVSAFVKEHN HDLVPPDQVH 180 CLRSHRQISG PAKTLIDTLQ AAGMGPRRIM SALIKEYGGI SKVGFTEVDC RNYMRNNRQR 240 SLEGDIQILH DYLRQMRADN PSSFFYAVQG QGQGDDQDEQ CSSTGNVFWA DANARANYTY 300 FGDTVTFDTT YRSNRYRLPF APFTGVNHHG QPVLFGCAFL MNESESSFVW LFKTWITAMS 360 GRFPVSITTD HDSVIQSAVM QVFPDTRHRF CKWHIFNKCQ DQLSDVFLQY PNFEADLHKC 420 VNLTDSIDEF EACWLSLVDK YQLTDDEWLQ EIYSSRIQWV PVYLRDTFFA EMSITQRSDS 480 MNSYFDGYIN ASTTLNQFVK MYEKALESRN EKEVKADYDT MNTLPVLRTP SPMEKQASQL 540 YTRKIFMRFQ EELVETLTLM ASKTEAEDDD GDVTTTYQVA KFGEEDKSYR VNFNVLEMKA 600 SCSCCMFEFS GLLCRHVLAV FRVTNVLTLP SSYILKRWTI NAKSSVILEE NALFSSYLES 660 HTVRYNTLKH KALKFVEEGA ESVDTYNVAM IALEEAARRI SIAAKNEGTI NGRNNRECLR 720 SNGTLAKRNT GNHHGDVDHN LSEDEMERKI QELNNELDXV RRKCEVYRAN LLSVLKDIED 780 HKQQLALKVQ IIKYSMKDCL

Sequence ? help Back to Top

Protein Sequence Length: 800 aa Download sequence

MENEVIEFDL GSGRDDDVDN DDDDDDEIHS PTLGVGVNGF FLDHTNTNSS PSYYYHHTST  60
SSSGSDLEPC EGMEFESEEA AKAFYNSYAR RVGFSTRVSS SRRSRKDGAI IQRSFVCAKE  120
GFRNLNEKRT KDREIKRPRT VTRVGCKASM SVKIQHSGKW LVSAFVKEHN HDLVPPDQVH  180
CLRSHRQISG PAKTLIDTLQ AAGMGPRRIM SALIKEYGGI SKVGFTEVDC RNYMRNNRQR  240
SLEGDIQILH DYLRQMRADN PSSFFYAVQG QGQGDDQDEQ CSSTGNVFWA DANARANYTY  300
FGDTVTFDTT YRSNRYRLPF APFTGVNHHG QPVLFGCAFL MNESESSFVW LFKTWITAMS  360
GRFPVSITTD HDSVIQSAVM QVFPDTRHRF CKWHIFNKCQ DQLSDVFLQY PNFEADLHKC  420
VNLTDSIDEF EACWLSLVDK YQLTDDEWLQ EIYSSRIQWV PVYLRDTFFA EMSITQRSDS  480
MNSYFDGYIN ASTTLNQFVK MYEKALESRN EKEVKADYDT MNTLPVLRTP SPMEKQASQL  540
YTRKIFMRFQ EELVETLTLM ASKTEAEDDD GDVTTTYQVA KFGEEDKSYR VNFNVLEMKA  600
SCSCCMFEFS GLLCRHVLAV FRVTNVLTLP SSYILKRWTI NAKSSVILEE NALFSSYLES  660
HTVRYNTLKH KALKFVEEGA ESVDTYNVAM IALEEAARRI SIAAKNEGTI NGRNNRECLR  720
SNGTLAKRNT GNHHGDVDHN LSEDEMERKI QELNNELDXV RRKCEVYRAN LLSVLKDIED  780
HKQQLALKVQ IIKYSMKDCL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	0.0	FAR1 family protein