PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc010667.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

NAC

Protein Properties

Length: 449aa MW: 51380.6 Da PI: 8.3047

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc010667.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	170.6	4.8e-53	8	137	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWka 85 +ppGfrFhPtdeel+++yLkkk++ +k+++ +vi+evd++k+ePwdL++++k e+ewyfFs++dkky+tg+r+nrat++g+Wka Cse_sc010667.1_g010.1 8 VPPGFRFHPTDEELLHFYLKKKISFEKFDM-DVIREVDLNKIEPWDLQERCKIgstPENEWYFFSHKDKKYPTGSRTNRATNAGFWKA 94 69**************************.99**********964444222556************************* PP NAM 86 tgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrle 129 tg+dk + + + +++g++ktLvfy+grap+g+ktdW+mheyrle Cse_sc010667.1_g010.1 95 TGRDKCIRN-TFKKIGMRKTLVFYRGRAPHGQKTDWIMHEYRLE 137 ****9.8899**************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 449 aa Download sequence
MGSSNGGVPP GFRFHPTDEE LLHFYLKKKI SFEKFDMDVI REVDLNKIEP WDLQERCKIG 60 STPENEWYFF SHKDKKYPTG SRTNRATNAG FWKATGRDKC IRNTFKKIGM RKTLVFYRGR 120 APHGQKTDWI MHEYRLEDVD DHHDPLNPLQ ITTSEDGWVI CRVFKKRNLF KVGGNEALSG 180 STVSEQRNIT QLRTFPYAQE NHQYLPYHQQ QQQQQNFDLG LNYTHQYPHP MPTHKPLGYG 240 FLNLPAEESP IMVRQXLEVD TSEAAQSLVN TNVREETLNE WGMMSHLSQP NEDTILPKGM 300 LRYRDDATSS SSMQQINQLS LRAGVDFWGC KNQLTRNKAE ADKQFAKLLQ LLKALQPPAT 360 TLPPLSYPAT LPPHQTIIKT PLSNPLTLPI SAQNQYHDAY SPFSVQPSAT YMSFSGLQFD 420 SQGFPLPMSQ PGDVSGNQNS KPPITNDRN

Sequence ? help Back to Top

Protein Sequence Length: 449 aa Download sequence

MGSSNGGVPP GFRFHPTDEE LLHFYLKKKI SFEKFDMDVI REVDLNKIEP WDLQERCKIG  60
STPENEWYFF SHKDKKYPTG SRTNRATNAG FWKATGRDKC IRNTFKKIGM RKTLVFYRGR  120
APHGQKTDWI MHEYRLEDVD DHHDPLNPLQ ITTSEDGWVI CRVFKKRNLF KVGGNEALSG  180
STVSEQRNIT QLRTFPYAQE NHQYLPYHQQ QQQQQNFDLG LNYTHQYPHP MPTHKPLGYG  240
FLNLPAEESP IMVRQXLEVD TSEAAQSLVN TNVREETLNE WGMMSHLSQP NEDTILPKGM  300
LRYRDDATSS SSMQQINQLS LRAGVDFWGC KNQLTRNKAE ADKQFAKLLQ LLKALQPPAT  360
TLPPLSYPAT LPPHQTIIKT PLSNPLTLPI SAQNQYHDAY SPFSVQPSAT YMSFSGLQFD  420
SQGFPLPMSQ PGDVSGNQNS KPPITNDRN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G10350.1	1e-120	NAC family protein