PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc010580.1_g060.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

NAC

Protein Properties

Length: 385aa MW: 43493.9 Da PI: 5.1568

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc010580.1_g060.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	168.4	2.4e-52	19	146	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkat 86 l+pGfrFhPtdeelv++yL++k+ gk++++ ++++e+d+yk+ePw+L + +k++++ewyfFs+ d+ky +g+r nrat +gyWkat Cse_sc010580.1_g060.1 19 LAPGFRFHPTDEELVMYYLRRKACGKPFRF-QAVSEIDVYKSEPWELAdfSPLKTRDQEWYFFSPVDRKYGNGSRLNRATGKGYWKAT 105 579***********************99.88**********75347788999************************** PP NAM 87 gkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 gkd++v + k+e++g+kktLvf++grap+g++t+Wvmheyrl Cse_sc010580.1_g060.1 106 GKDRAVRH-KSETIGMKKTLVFHSGRAPDGKRTNWVMHEYRL 146 ****.999**************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 385 aa Download sequence
MGGHELMGVT SPPPPPTSLA PGFRFHPTDE ELVMYYLRRK ACGKPFRFQA VSEIDVYKSE 60 PWELADFSPL KTRDQEWYFF SPVDRKYGNG SRLNRATGKG YWKATGKDRA VRHKSETIGM 120 KKTLVFHSGR APDGKRTNWV MHEYRLLDQE LLRVGVTQDS FVLCRIFQKS GLGPPNGDRY 180 APFLEEEWTD DTALMVPGGE AEDDMANGDE TRAEGNDIVQ ETSAKKILDR SEDPQPITIV 240 CKRERSEEDH ALTQEPELET FSLFHNKRSK PNDPNCSNAN GSEDSTTTSQ DPRRALLEFP 300 LLESIEAKEC HPQTTLPSFD AATLEKSVPP GYLKFISNLE NEILNVSMEK ETLKIEVMRA 360 QAMIDILQSR IEVLSKENGG FRTGG

Sequence ? help Back to Top

Protein Sequence Length: 385 aa Download sequence

MGGHELMGVT SPPPPPTSLA PGFRFHPTDE ELVMYYLRRK ACGKPFRFQA VSEIDVYKSE  60
PWELADFSPL KTRDQEWYFF SPVDRKYGNG SRLNRATGKG YWKATGKDRA VRHKSETIGM  120
KKTLVFHSGR APDGKRTNWV MHEYRLLDQE LLRVGVTQDS FVLCRIFQKS GLGPPNGDRY  180
APFLEEEWTD DTALMVPGGE AEDDMANGDE TRAEGNDIVQ ETSAKKILDR SEDPQPITIV  240
CKRERSEEDH ALTQEPELET FSLFHNKRSK PNDPNCSNAN GSEDSTTTSQ DPRRALLEFP  300
LLESIEAKEC HPQTTLPSFD AATLEKSVPP GYLKFISNLE NEILNVSMEK ETLKIEVMRA  360
QAMIDILQSR IEVLSKENGG FRTGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10480.2	1e-106	NAC family protein