PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc010553.1_g060.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 821aa MW: 92818.1 Da PI: 6.5469

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc010553.1_g060.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	35.5	3.3e-11	126	209	2	80
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkekdgkwevtk 80 +Y +YA+e+GF +rks++k+ r+g ++++ +vC++eg +++ + + +k+ rt++ tgCka+ + +++ + v+ Cse_sc010553.1_g060.1 126 MYMRYASEAGFGIRKSTQKRL-RDGFVKEKYLVCNREGCPKKISLNtlapkkGDKQVRTSNFRITGCKARAVFHMMPGSSALVHG 209 8*************99998.9999**********999888899887778888999999****999888766666655 PP

Sequence ? help Back to Top
Protein Sequence Length: 821 aa Download sequence
MVIVVMLSSS ETEVEVNHHI LHRDHRTTTV ISVTCSTLSH RMEIIDLNEV PVGDDSIDLD 60 VTSSNCASNV DDNASSSSGF KTPSSFIHHD FIDTPGGSVF WVPRVAASVL PVLFSVYDSV 120 EDCISMYMRY ASEAGFGIRK STQKRLRDGF VKEKYLVCNR EGCPKKISLN TLAPKKGDKQ 180 VRTSNFRITG CKARAVFHMM PGSSALVHGT ETEFNNLVRG INCFIGDSDA QMLINRMEDR 240 MKFTSDFSFD YLVENAELIG LFWADQVAKL NYKEFGDIVS FDATYKTNKR SVTVGSGLLK 300 NETTKSYVWL LQAFKKAFVR SPNIIVTDQD GAMRKAIAEV LPDSKHMLCM WHIMQKLPSK 360 NKFHKIVWNM YIGPEEFELR WNELMVEFGL LNHKWLNKMY RIRASWIPAF FVDSPLCGLM 420 RTTSRSESEN SFFSHFTSPT STLVKFMVCY ESAMEKQRYI QERLDHQLID SFPALLTPLA 480 IEIHAARFYT RKLFVLVQKE IIAGSWLCSI KSKSCGEGCD VSVISEEKPD AEIVPRVVDD 540 ESTSDNTEEE LNLYQKDIGD CGEGCDVSVI SEEKPDAEIV PRVVDDESTS DNTEEELNLY 600 QKDIGEYEVL YNKVDGSVAC CCQLFVRCGI LCRHIFCVFK NCKNCKVVSI PDKYLLRRWT 660 RDLIPADLRR QKARYGQNNE EIERLAIEAT GLVESCVHMM SNNKGKLTSF VDKLKKLKTE 720 VEADLPTVPS RNVSEIVEEF MGSFRCNKGF MRERIKGGRE KAFDKSKKQK KSCSICGSTE 780 HNRATCPDKG KYLTNNAEVG GSSAEGVLVQ VEVESSAQPL Q

Sequence ? help Back to Top

Protein Sequence Length: 821 aa Download sequence

MVIVVMLSSS ETEVEVNHHI LHRDHRTTTV ISVTCSTLSH RMEIIDLNEV PVGDDSIDLD  60
VTSSNCASNV DDNASSSSGF KTPSSFIHHD FIDTPGGSVF WVPRVAASVL PVLFSVYDSV  120
EDCISMYMRY ASEAGFGIRK STQKRLRDGF VKEKYLVCNR EGCPKKISLN TLAPKKGDKQ  180
VRTSNFRITG CKARAVFHMM PGSSALVHGT ETEFNNLVRG INCFIGDSDA QMLINRMEDR  240
MKFTSDFSFD YLVENAELIG LFWADQVAKL NYKEFGDIVS FDATYKTNKR SVTVGSGLLK  300
NETTKSYVWL LQAFKKAFVR SPNIIVTDQD GAMRKAIAEV LPDSKHMLCM WHIMQKLPSK  360
NKFHKIVWNM YIGPEEFELR WNELMVEFGL LNHKWLNKMY RIRASWIPAF FVDSPLCGLM  420
RTTSRSESEN SFFSHFTSPT STLVKFMVCY ESAMEKQRYI QERLDHQLID SFPALLTPLA  480
IEIHAARFYT RKLFVLVQKE IIAGSWLCSI KSKSCGEGCD VSVISEEKPD AEIVPRVVDD  540
ESTSDNTEEE LNLYQKDIGD CGEGCDVSVI SEEKPDAEIV PRVVDDESTS DNTEEELNLY  600
QKDIGEYEVL YNKVDGSVAC CCQLFVRCGI LCRHIFCVFK NCKNCKVVSI PDKYLLRRWT  660
RDLIPADLRR QKARYGQNNE EIERLAIEAT GLVESCVHMM SNNKGKLTSF VDKLKKLKTE  720
VEADLPTVPS RNVSEIVEEF MGSFRCNKGF MRERIKGGRE KAFDKSKKQK KSCSICGSTE  780
HNRATCPDKG KYLTNNAEVG GSSAEGVLVQ VEVESSAQPL Q

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	712	717	DKLKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	6e-41	FAR1 family protein