PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc010503.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

HSF

Protein Properties

Length: 468aa MW: 52318 Da PI: 6.3495

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc010503.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	116.4	1.8e-36	27	119	2	103
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkg 89 Fl k+y++++d+++++++sws+ +n+fvv+d+ efak++LpkyFkh+nf+SFvRQLn+YgF+kv+ ++ weF+++ F +g Cse_sc010503.1_g020.1 27 FLVKTYDMVDDPSTDKVVSWSAANNTFVVWDPPEFAKDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDR---------WEFANEGFLRG 105 9******************999*************************************999.........******* PP XXXXXXXXXXXXXX CS HSF_DNA-bind 90 kkellekikrkkse 103 +k+ll++i r+ks+ Cse_sc010503.1_g020.1 106 QKHLLKTIVRRKSA 119 *********985 PP

Sequence ? help Back to Top
Protein Sequence Length: 468 aa Download sequence
MEPPRSSNDG AAIPPPPMPA ANAPPPFLVK TYDMVDDPST DKVVSWSAAN NTFVVWDPPE 60 FAKDLLPKYF KHNNFSSFVR QLNTYGFRKV DPDRWEFANE GFLRGQKHLL KTIVRRKSAS 120 GHTQPQQPPH QQTSSMGACV EVGKFGLEEE VERLKRDKNV LMQELVRLRQ QQQTTDNQMQ 180 SMVKRLQGME QRQQQMMSFL AKAVNSPGFL AHFVQQQNES TRLITEGNKK RRYKEDTVLS 240 TVDSPDGRIV KYQPMMNDAA QAMLKQIMKL DSPSSRLNTF SSGVTLQDVT PSPSSQSYLP 300 AVTGVLSAPL EADSEVVAAD HFPDAISLID GQDLPDVSDL SHLQEMAPDA SIESYMHPET 360 PNLPLDIGSF SPEVDVEWDS NLLTEMEKST NNIYLSKQQP PDCKNGIIIS DLSKPQPPPL 420 HRHHHRHHQR PAIRRCHSQM VCCGGDGGGL RWVSTGTIAL EESSSEIG

Sequence ? help Back to Top

Protein Sequence Length: 468 aa Download sequence

MEPPRSSNDG AAIPPPPMPA ANAPPPFLVK TYDMVDDPST DKVVSWSAAN NTFVVWDPPE  60
FAKDLLPKYF KHNNFSSFVR QLNTYGFRKV DPDRWEFANE GFLRGQKHLL KTIVRRKSAS  120
GHTQPQQPPH QQTSSMGACV EVGKFGLEEE VERLKRDKNV LMQELVRLRQ QQQTTDNQMQ  180
SMVKRLQGME QRQQQMMSFL AKAVNSPGFL AHFVQQQNES TRLITEGNKK RRYKEDTVLS  240
TVDSPDGRIV KYQPMMNDAA QAMLKQIMKL DSPSSRLNTF SSGVTLQDVT PSPSSQSYLP  300
AVTGVLSAPL EADSEVVAAD HFPDAISLID GQDLPDVSDL SHLQEMAPDA SIESYMHPET  360
PNLPLDIGSF SPEVDVEWDS NLLTEMEKST NNIYLSKQQP PDCKNGIIIS DLSKPQPPPL  420
HRHHHRHHQR PAIRRCHSQM VCCGGDGGGL RWVSTGTIAL EESSSEIG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	229	234	KKRRYK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32330.1	1e-115	HSF family protein