PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc010456.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family GATA
Protein Properties Length: 275aa    MW: 30726.2 Da    PI: 5.9716
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc010456.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA57.32.1e-18179213135
                   GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                            C +Cg+ kTp+WR+gp g+ktLCnaCG+++++ +l
  Cse_sc010456.1_g010.1 179 CLHCGSDKTPQWRKGPMGPKTLCNACGVRFKSGRL 213
                            99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
METFNSNQFT VDDLLLDFPA DDDLMLSDSF DFSASNSSSL SGNESSQFSG SCFGVEESQF  60
SGGELCVPYD ELAELEWLSR FTEESFSSDD LKNLRLISAG NITPVTDTSS SVTGVTKCYN  120
RNNSPIFQND VLVPGKIRSK RSRAAPGDWS SRLIHLKSTV EIDRVNETDE CKTDNVRRCL  180
HCGSDKTPQW RKGPMGPKTL CNACGVRFKS GRLVPEYRPA ASPTFVPAKH SNSHRKVMEL  240
RRQMELRDAQ QRGSGYGGDE YLIHRQIGPN FMHMI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32890.12e-65GATA family protein