PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc010378.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family LSD
Protein Properties Length: 316aa    MW: 35074.8 Da    PI: 8.4226
Description LSD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc010378.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-LSD146.55.9e-15158181124
                zf-LSD1   1 CggCrtlLsYPrGApsVRCalCdt 24 
                            Cg+Crt+L+YP+GApsV+Ca+C+ 
  Cse_sc010378.1_g020.1 158 CGNCRTMLMYPYGAPSVKCAVCQY 181
                            **********************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MATSSQRRSK HDMERVMRWN VSEAMGIAWM ECLQSVDSNS VYGKDFNALS YKCVALLIGS  60
LAFARNMQRS EVDRRARVDF IARHRRCTVG LLAEYGILPP LTNAAALSDS IKHLHDQMQQ  120
KIRASRSQGQ QQFAPSPYNN PTGGRHLKPN YEVAQVNCGN CRTMLMYPYG APSVKCAVCQ  180
YITNVNILRL IYTNSGNAIL ALASTNIHLL WKWQRNDRNS SGKATASVSP QLWQPSSGLL  240
MTNDVANTDP EESIACFATT ISIIHESFLD VSLLISHANC CSKDNSTPFL QSCTTNGDSD  300
GSFFSSCLLG FIWNIN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20380.12e-15LSD family protein