PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc010366.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MYB

Protein Properties

Length: 363aa MW: 42524.5 Da PI: 4.5724

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc010366.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.9	1.1e-18	35	82	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +grWT+eEde+l+++++ +G g+Wk+ ++ g+ R++k+c++rw +yl Cse_sc010366.1_g030.1 35 KGRWTPEEDERLIKYIQDYGEGSWKSLPKIAGLSRCGKSCRLRWINYL 82 79********************************************97 PP
2	Myb_DNA-binding	48.4	2.1e-15	88	131	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ + eEde +v++++ lG++ W+ Ia++++ gRt++++k++w + Cse_sc010366.1_g030.1 88 RGNISVEEDEMIVRLHEVLGSR-WSIIASHLP-GRTDNEIKNHWKT 131 78999***************.*****.*********86 PP

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence
MGRAPYCEKV ELKKGRWTPE EDERAPYCEK VELKKGRWTP EEDERLIKYI QDYGEGSWKS 60 LPKIAGLSRC GKSCRLRWIN YLRDDLKRGN ISVEEDEMIV RLHEVLGSRW SIIASHLPGR 120 TDNEIKNHWK TRLSRQLYRF IRNTNEETQI SIDIATVVKP KKQRVGRVSR SVAKKYNKHR 180 VVEDNKSTPS RKLVDRLVLD QDAVGFRDDD ELELNCLEFH DDLNELGSDP IEFQDVNEHV 240 WNLFQADELE PSTLLFQDDH ELGLNTFEIQ DDELIDIKQF LDNEAVDSSV NLSKYDMDQM 300 ETLFAESDVV KNNERNAYDS NLSLNFSATM ELCFDENDTD MDFGPKGCNI CDEKDDRFVW 360 PWV

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence

MGRAPYCEKV ELKKGRWTPE EDERAPYCEK VELKKGRWTP EEDERLIKYI QDYGEGSWKS  60
LPKIAGLSRC GKSCRLRWIN YLRDDLKRGN ISVEEDEMIV RLHEVLGSRW SIIASHLPGR  120
TDNEIKNHWK TRLSRQLYRF IRNTNEETQI SIDIATVVKP KKQRVGRVSR SVAKKYNKHR  180
VVEDNKSTPS RKLVDRLVLD QDAVGFRDDD ELELNCLEFH DDLNELGSDP IEFQDVNEHV  240
WNLFQADELE PSTLLFQDDH ELGLNTFEIQ DDELIDIKQF LDNEAVDSSV NLSKYDMDQM  300
ETLFAESDVV KNNERNAYDS NLSLNFSATM ELCFDENDTD MDFGPKGCNI CDEKDDRFVW  360
PWV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47460.1	4e-64	MYB family protein