PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc010253.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 569aa MW: 64966.6 Da PI: 9.0153

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc010253.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	55.4	2.1e-17	28	122	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.........tekerrtraetrtgCkaklkvkkekdgkwevtk 80 Y++YA e+GF vr+ ++++ g +++++f Cskeg+++ + k+ ++ +r ++e t+Cka++ v k+ +k++v+ Cse_sc010253.1_g010.1 28 AYKDYAVEAGFIVRRGHQTND--GGIVINKEFLCSKEGTKKVKVKEfdslkdncdAKAVKRITSEFWTNCKARIYVVKS-GEKYRVKI 112 5*************98877..99****************999998777788888999*****999.9*** PP FAR1 81 leleHnHela 90 +++eHnH ++ Cse_sc010253.1_g010.1 113 FVEEHNHGFF 122 *****986 PP

Sequence ? help Back to Top
Protein Sequence Length: 569 aa Download sequence
MLIKPAVVKT LVPVEGALFD SVEEDYKAYK DYAVEAGFIV RRGHQTNDGG IVINKEFLCS 60 KEGTKKVKVK EFDSLKDNCD AKAVKRITSE FWTNCKARIY VVKSGEKYRV KIFVEEHNHG 120 FFTTEDRHLQ KSHRSMSLAH QGYENVGGTK IDFKNMSRDI YSYIGKYDAQ MIIDKFSILK 180 ERDENFMFEF KTNTDGQLSC LFWSDDTSKR NYEAFGDVLS FDATYKTNID IPMSGLMKTT 240 SRSESENYFF GHNSNWSSTL VHFLFRYESA LDQQRNNQRV LDNNSRINRP SLKTNHLVEQ 300 HAAEFYTLEA FYVVQAEIVA SIESCTGSMK SLGYVEYNEE TRSVNCSCLH FERCGLLCRH 360 AFYTLRGYGI NKIPKQYLLR RWKKEAVVLP LLGSSFKVNG SSGSCISKIY SKVNSIINHC 420 GYDEEKLGIF FEKLSTYESG LESSTVAQSS GNKEDSISSM IGIPKPPAID VFPPDIGSNK 480 GGVTGARYKP SNNDVRFKDP KECGKNLIKC RICNILTDHD YRNCPNNPDR KVLTAKKDIK 540 KTKRNGRKVK RKSNKANVEH GTEEFNFKE

Sequence ? help Back to Top

Protein Sequence Length: 569 aa Download sequence

MLIKPAVVKT LVPVEGALFD SVEEDYKAYK DYAVEAGFIV RRGHQTNDGG IVINKEFLCS  60
KEGTKKVKVK EFDSLKDNCD AKAVKRITSE FWTNCKARIY VVKSGEKYRV KIFVEEHNHG  120
FFTTEDRHLQ KSHRSMSLAH QGYENVGGTK IDFKNMSRDI YSYIGKYDAQ MIIDKFSILK  180
ERDENFMFEF KTNTDGQLSC LFWSDDTSKR NYEAFGDVLS FDATYKTNID IPMSGLMKTT  240
SRSESENYFF GHNSNWSSTL VHFLFRYESA LDQQRNNQRV LDNNSRINRP SLKTNHLVEQ  300
HAAEFYTLEA FYVVQAEIVA SIESCTGSMK SLGYVEYNEE TRSVNCSCLH FERCGLLCRH  360
AFYTLRGYGI NKIPKQYLLR RWKKEAVVLP LLGSSFKVNG SSGSCISKIY SKVNSIINHC  420
GYDEEKLGIF FEKLSTYESG LESSTVAQSS GNKEDSISSM IGIPKPPAID VFPPDIGSNK  480
GGVTGARYKP SNNDVRFKDP KECGKNLIKC RICNILTDHD YRNCPNNPDR KVLTAKKDIK  540
KTKRNGRKVK RKSNKANVEH GTEEFNFKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-17	FAR1 family protein