PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc010220.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

ERF

Protein Properties

Length: 498aa MW: 55180.5 Da PI: 6.7198

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc010220.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	47.3	5.1e-15	266	317	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g Cse_sc010220.1_g020.1 266 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 317 57**************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 498 aa Download sequence
MKPQLMWQPM PAIEPTDVNI GRRNNQTMNN MDSSHQSQHH QNPSNNWLTF SLSNTNNNTN 60 TLFQQSPLAS VFHHDNGHDT TTTTTTSSRH DQLSILTDSS PKLEDFLGGC GSAASTGSGP 120 ATCHFIDETQ TCMQQQQPQH DVTTASIYDS ELKTIAASFL RGYTADNNHG QQVLSVAHTP 180 PQQDNPPAKK AVDTFGQRTS IYRGIDGQGD MKLIYGITVA EEKVKVEKED KVCNYEKELE 240 EMKNMTRQEF VASLRRKSSG FSRGASIYRG VTRHHQHGRW QARIGRVAGN KDLYLGTFST 300 QEEAAEAYDI AAIKFRGLNA VTNFDMSRYD VNSIANKNLP IGGMCSKSKT SADHSRPNNI 360 QKSDGQDFSP TSQQPTNSNI LSFALPMKQD PSTDYWNSVL AYNQNQNQFQ NTTPYTMEYP 420 SSTTNNGYYN TNGGFIQQEN NNGNSTSVAL STTSTIPMGT PIGLNGSSYG NWIEQSFHSN 480 QPAKQNLSAF QTPIFGME

Sequence ? help Back to Top

Protein Sequence Length: 498 aa Download sequence

MKPQLMWQPM PAIEPTDVNI GRRNNQTMNN MDSSHQSQHH QNPSNNWLTF SLSNTNNNTN  60
TLFQQSPLAS VFHHDNGHDT TTTTTTSSRH DQLSILTDSS PKLEDFLGGC GSAASTGSGP  120
ATCHFIDETQ TCMQQQQPQH DVTTASIYDS ELKTIAASFL RGYTADNNHG QQVLSVAHTP  180
PQQDNPPAKK AVDTFGQRTS IYRGIDGQGD MKLIYGITVA EEKVKVEKED KVCNYEKELE  240
EMKNMTRQEF VASLRRKSSG FSRGASIYRG VTRHHQHGRW QARIGRVAGN KDLYLGTFST  300
QEEAAEAYDI AAIKFRGLNA VTNFDMSRYD VNSIANKNLP IGGMCSKSKT SADHSRPNNI  360
QKSDGQDFSP TSQQPTNSNI LSFALPMKQD PSTDYWNSVL AYNQNQNQFQ NTTPYTMEYP  420
SSTTNNGYYN TNGGFIQQEN NNGNSTSVAL STTSTIPMGT PIGLNGSSYG NWIEQSFHSN  480
QPAKQNLSAF QTPIFGME

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57390.1	5e-81	AP2 family protein