PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc010198.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

bHLH

Protein Properties

Length: 430aa MW: 47163.8 Da PI: 8.0091

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc010198.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	11.4	0.0006	235	273	12	55
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 R +++ +++ L +l+ + +K + a++L +A+ YI+ Lq Cse_sc010198.1_g020.1 235 RKEKLGDRITALHQLVSPF-----GKTDTASVLLEAIGYIRFLQ 273 6677888999999999998.....8******************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 430 aa Download sequence
MNRGNVLQSS PVQQMTAGGP KGWWSMMATT RPSTPPPPQQ PFFASSAQPH FFPHQYAPPL 60 TIPSSQAPWH TNQEVPDSLS QLLMSGLVSD DDKSALSHMQ EVKKLENWEQ QLLLRDHHRQ 120 QHQHSCLNGQ AMEESTIKQE NSLNYGSSYG QGNAEFHGTK PCNWSNQMIP VSSPTSCVSS 180 VSNNMLDFST TTNNKADGRH PAPDRSSECN STATGGASKK AKIQPSSSQS TFKVRKEKLG 240 DRITALHQLV SPFGKTDTAS VLLEAIGYIR FLQSQIEALS LPYLGGGSAG NVRNHQHSVQ 300 QGERNCLFPE DPGQLVNDSC MKMKGPALDQ DSHEEPKRDL RSRGLCLVPV SCTMQVGSDN 360 VADYWAPALN GGFRSDKGSD ALTKVSIEGF IQRLCQANKS FWAVTRSMNL AHMEFHGFST 420 APKLLSWGGR

Sequence ? help Back to Top

Protein Sequence Length: 430 aa Download sequence

MNRGNVLQSS PVQQMTAGGP KGWWSMMATT RPSTPPPPQQ PFFASSAQPH FFPHQYAPPL  60
TIPSSQAPWH TNQEVPDSLS QLLMSGLVSD DDKSALSHMQ EVKKLENWEQ QLLLRDHHRQ  120
QHQHSCLNGQ AMEESTIKQE NSLNYGSSYG QGNAEFHGTK PCNWSNQMIP VSSPTSCVSS  180
VSNNMLDFST TTNNKADGRH PAPDRSSECN STATGGASKK AKIQPSSSQS TFKVRKEKLG  240
DRITALHQLV SPFGKTDTAS VLLEAIGYIR FLQSQIEALS LPYLGGGSAG NVRNHQHSVQ  300
QGERNCLFPE DPGQLVNDSC MKMKGPALDQ DSHEEPKRDL RSRGLCLVPV SCTMQVGSDN  360
VADYWAPALN GGFRSDKGSD ALTKVSIEGF IQRLCQANKS FWAVTRSMNL AHMEFHGFST  420
APKLLSWGGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29100.1	3e-85	bHLH family protein