PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc010171.1_g030.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | B3 | ||||||||
Protein Properties | Length: 209aa MW: 23939.7 Da PI: 6.058 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 40.4 | 5.4e-13 | 106 | 193 | 1 | 97 |
EEEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 f+k +++s+ + l lp +f++e+ k ++ +tl de+g + k+ +++++ l+ GW++F +++L gD +vF+l++ Cse_sc010171.1_g030.1 106 FVKPMLQSYRYS---LPLPSDFCRENlP--K-NDAIITLIDEEGDEVPTKY--LAYKDAFKLSLGWNGFSTSHELVCGDALVFQLVEP 185 677887777776...56*********42..2.4568***************..*******************************9986 PP SEE..EEEEE CS B3 88 sefelvvkvf 97 + f +v ++ Cse_sc010171.1_g030.1 186 TVF--KVYII 193 777..66665 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 209 aa Download sequence |
MRIFPLVFLV VYERFENVFA LRIFLSFKLY MMKRAKPRVI GTEMVEVRRS SRVASSPAPV 60 YKEIVVYERV TMIKSGGKYA SDEATYWATT KAEEIKTSLE GGYPSFVKPM LQSYRYSLPL 120 PSDFCRENLP KNDAIITLID EEGDEVPTKY LAYKDAFKLS LGWNGFSTSH ELVCGDALVF 180 QLVEPTVFKV YIIRCKGYEE GENNEALEA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G19184.1 | 2e-35 | B3 family protein |