PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc010125.1_g060.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 790aa MW: 90740.9 Da PI: 9.0911

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc010125.1_g060.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	54.4	4.1e-17	102	197	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtkl 81 ++Y++YA+ GF+++ks ++ + ++g + ++ +C+keg +++ + + ++k++r+++ + tgCka++++++++ +gk+++ ++ Cse_sc010125.1_g060.1 102 EMYSTYAEAGGFQTKKSGQRLT-KSGMVQHKYIMCNKEGIPRRINIDtldpqnSDKQKRNTTLHITGCKARIRLELDQvSGKYKLVQF 188 58*************98888.778899*******99877777889888899999999********************* PP FAR1 82 eleHnHela 90 +HnH l Cse_sc010125.1_g060.1 189 IAKHNHVLI 197 ****996 PP

Sequence ? help Back to Top
Protein Sequence Length: 790 aa Download sequence
MNENQNLIDV IDENNLIEVP LDVVNTTSVV DDLPDLEDDL QEVEDITGFV EKEIEDYMRS 60 PRPTLYEHSE TPGGSICWEP HVEGIRVPEE GKYYDTIEEA IEMYSTYAEA GGFQTKKSGQ 120 RLTKSGMVQH KYIMCNKEGI PRRINIDTLD PQNSDKQKRN TTLHITGCKA RIRLELDQVS 180 GKYKLVQFIA KHNHVLIPKE YKHFTKKQRR MTQADKMFIV KAATNKIGAT RAHNFLTSLK 240 GVYEYVHGTS DDFKNHQRNI NAFIGESDPE MLINKMENRK MYVPNFTFQY KVENSELVAM 300 FWADEVAKCN YKEFGDIVPH GVCTITGVDN HRKCVTFGSG MLLKEDTESY TWLLTAFMSA 360 FKKEPTMVVT YQDGAMKRAI EAVFTNSKHR LCMWHIDQKI PAKICQAIYK ETDFKKRFKK 420 IIWNMFMEPL EFEEKWAKLI EDFGLKNHKW MTKMFNLRKM WIPAYFIDSP LFGLMRTTSR 480 SESENSFFKS FTSPGATLVS FMMSYEAAME RQRYRQEHLD FKTLDATPKC DTRHFARYGF 540 LCQHIFCVFK NRDIDVIPNQ YILRRWTRDI IPPDLRRKRN RYGEKNVEVE RLTNEATCLL 600 DDCLFRLGND VVKMGEFVEK MKKLKKEVED EVPNAPSGKT TDVIGEHFSI SKPEKKTVNN 660 PTKASNKGNI SQAERNKRRK SEREKALTIK KKQMKPCGHC GEKKNSHTKT TCPLNPKARR 720 KAPHNRLQSG VDNPSGSGLG VEVGVGTGSM VGQAVQVNVV AREADKVNPN GSGVSVKVGG 780 SRPSEPTSVD

Sequence ? help Back to Top

Protein Sequence Length: 790 aa Download sequence

MNENQNLIDV IDENNLIEVP LDVVNTTSVV DDLPDLEDDL QEVEDITGFV EKEIEDYMRS  60
PRPTLYEHSE TPGGSICWEP HVEGIRVPEE GKYYDTIEEA IEMYSTYAEA GGFQTKKSGQ  120
RLTKSGMVQH KYIMCNKEGI PRRINIDTLD PQNSDKQKRN TTLHITGCKA RIRLELDQVS  180
GKYKLVQFIA KHNHVLIPKE YKHFTKKQRR MTQADKMFIV KAATNKIGAT RAHNFLTSLK  240
GVYEYVHGTS DDFKNHQRNI NAFIGESDPE MLINKMENRK MYVPNFTFQY KVENSELVAM  300
FWADEVAKCN YKEFGDIVPH GVCTITGVDN HRKCVTFGSG MLLKEDTESY TWLLTAFMSA  360
FKKEPTMVVT YQDGAMKRAI EAVFTNSKHR LCMWHIDQKI PAKICQAIYK ETDFKKRFKK  420
IIWNMFMEPL EFEEKWAKLI EDFGLKNHKW MTKMFNLRKM WIPAYFIDSP LFGLMRTTSR  480
SESENSFFKS FTSPGATLVS FMMSYEAAME RQRYRQEHLD FKTLDATPKC DTRHFARYGF  540
LCQHIFCVFK NRDIDVIPNQ YILRRWTRDI IPPDLRRKRN RYGEKNVEVE RLTNEATCLL  600
DDCLFRLGND VVKMGEFVEK MKKLKKEVED EVPNAPSGKT TDVIGEHFSI SKPEKKTVNN  660
PTKASNKGNI SQAERNKRRK SEREKALTIK KKQMKPCGHC GEKKNSHTKT TCPLNPKARR  720
KAPHNRLQSG VDNPSGSGLG VEVGVGTGSM VGQAVQVNVV AREADKVNPN GSGVSVKVGG  780
SRPSEPTSVD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	9e-55	FAR1 family protein