PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc010086.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 618aa MW: 70623.9 Da PI: 6.21

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc010086.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	39.1	2.5e-12	144	237	3	90
FAR1 3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtklel 83 Y +Y ++GF vrks +k rng ++++ vC++eg ++ + + ++k+rr+++ + tgCka+++ + + k++++ + + Cse_sc010086.1_g010.1 144 YMKYVAKAGFIVRKSCQKIL-RNGVVKQKYIVCNREGCPKGIHIDtldlenSDKQRRSSNLHITGCKARVMFDLILgTIKYKLIIVYS 230 99*******999976665.9999*********99887778889889999999*************9999***** PP FAR1 84 eHnHela 90 HnHel Cse_sc010086.1_g010.1 231 IHNHELE 237 ***96 PP

Sequence ? help Back to Top
Protein Sequence Length: 618 aa Download sequence
MDSLQNSVST TFEEIGVTDI SPTSEEIVVS DLSSTSEEIV IVVTGISPTS EEIVVSNLSS 60 TSGEIVFSDD VSTKYAKEIV AYEYGDGSET IKNLNALKTP ESFVTHSNFD TPSGTIYYIP 120 KVPVDVLLFK GNVYNSIDEC ITTYMKYVAK AGFIVRKSCQ KILRNGVVKQ KYIVCNREGC 180 PKGIHIDTLD LENSDKQRRS SNLHITGCKA RVMFDLILGT IKYKLIIVYS IHNHELEREE 240 YKHLSKTERQ LTYVEQLFIV KAASVNIGAT RAHHLLIGDS DAQMLISKME NRKKHVPDFL 300 FDYLVENTEL ATIFWVDEVS KFLLKVRSPL LEVEQAQVHE LPCFVIIKTT EECFLEDTDI 360 RQVFSAINFD CLLDINEQIF LVFIFEFYKS VRIIRNTDDN ISIAFIINKR NFTLPLNTFA 420 QILRIPCEGI CMYSQDWAIS TQSFALDPKQ IYHTPLDEPE TIRDTIFKIR TDQSHINRNK 480 KLIHQQNTSP KASIQKKESF FSNAYDAIGA YRQKRINLGS PLWLRWRLDQ CVIAARETPI 540 EIHSESLGTY YEIYGHYLIV RSFMLRQFEL ARSVQLRPYN AIAFSGPIAV FVSVFLIYPL 600 GQSGWFFAPS FGDFITGH

Sequence ? help Back to Top

Protein Sequence Length: 618 aa Download sequence

MDSLQNSVST TFEEIGVTDI SPTSEEIVVS DLSSTSEEIV IVVTGISPTS EEIVVSNLSS  60
TSGEIVFSDD VSTKYAKEIV AYEYGDGSET IKNLNALKTP ESFVTHSNFD TPSGTIYYIP  120
KVPVDVLLFK GNVYNSIDEC ITTYMKYVAK AGFIVRKSCQ KILRNGVVKQ KYIVCNREGC  180
PKGIHIDTLD LENSDKQRRS SNLHITGCKA RVMFDLILGT IKYKLIIVYS IHNHELEREE  240
YKHLSKTERQ LTYVEQLFIV KAASVNIGAT RAHHLLIGDS DAQMLISKME NRKKHVPDFL  300
FDYLVENTEL ATIFWVDEVS KFLLKVRSPL LEVEQAQVHE LPCFVIIKTT EECFLEDTDI  360
RQVFSAINFD CLLDINEQIF LVFIFEFYKS VRIIRNTDDN ISIAFIINKR NFTLPLNTFA  420
QILRIPCEGI CMYSQDWAIS TQSFALDPKQ IYHTPLDEPE TIRDTIFKIR TDQSHINRNK  480
KLIHQQNTSP KASIQKKESF FSNAYDAIGA YRQKRINLGS PLWLRWRLDQ CVIAARETPI  540
EIHSESLGTY YEIYGHYLIV RSFMLRQFEL ARSVQLRPYN AIAFSGPIAV FVSVFLIYPL  600
GQSGWFFAPS FGDFITGH