PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc010019.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family GRAS
Protein Properties Length: 521aa    MW: 59093.5 Da    PI: 4.7614
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc010019.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS323.54.2e-991405161374
                   GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykal....ppsetseknsseelaalklf 84 
                            lv+lLl+cAeav  +d++la++lL+++   a+  gd++qR+  +f+ +L++rl+  ++++ +       ++  ++ +s+e++ a++l+
  Cse_sc010019.1_g030.1 140 LVHLLLACAEAVGCRDTKLAETLLSQIWYSANLLGDSLQRVSYCFATGLKSRLSLLQTNMNANGtiwgGVTLPTDVTSEEKIEAFHLL 227
                            68***************************************************997777666551122334555666*********** PP

                   GRAS  85 sevsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp...egppslRiTgvgspesgskeeleetgerLakfA 169
                            ++ +P+++f+++ aN aI++a  +++r+HiiD+++++ lQWp+L+++Las +    ++  +RiTg+   ++g+ +ele+  +  a  A
  Cse_sc010019.1_g030.1 228 HQNTPYIEFGFMSANDAIVQACRKKDRLHIIDLGMEHTLQWPSLIKTLASTSnqeVPSKFIRITGILG-DHGDMRELESSMDTVAAEA 314
                            *************************************************88854455779******99.778**************** PP

                   GRAS 170 eelgvpfefnvlvak.rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFler 256
                            ++lg+++ef++++   + e+l+ ++L++k++E+l Vn++l+lh+ ++es  + +   ++L+ +k+l P++++vveq+a+hn++ Fl r
  Cse_sc010019.1_g030.1 315 NSLGIRLEFHLIAGPaTAEMLTKDNLHLKEDETLFVNSILHLHTYVKESRGSLK---TILQSIKKLGPTLLTVVEQDANHNGPFFLGR 399
                            ***********855459999**************************87776666...9****************************** PP

                   GRAS 257 flealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkv 344
                            fle+l+yysa+fdslea ++r+s er k+Er  +++ei+n+va eg er+erhe++ +Wr++l++aGF+ v+ +     qa+ +    
  Cse_sc010019.1_g030.1 400 FLESLHYYSAIFDSLEACMGRNSMERLKIERNHFAEEIRNIVAYEGPERIERHERADQWRRQLGRAGFQVVAGN--KDRQANVMKGLR 485
                            *********************************************************************99765..556777777666 PP

                   GRAS 345 ksdgyrveee.sgslvlgWkdrpLvsvSaWr 374
                             +dgy+v ++ +g ++lgWk+rp++ + aW+
  Cse_sc010019.1_g030.1 486 CGDGYTVGNDqKGYALLGWKGRPIMLAAAWQ 516
                            679****977255566**************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 521 aa     Download sequence    
MEPINHFGFS YNNINQHLPI RKFSQAARVE EQHQYLSDDH TSWELVQQID DQVYPPDMEE  60
YQFVDNFFNI DQYNGNTSGD WLSSPEENQM QPFDPFVDID FDLDPDTFLM PDENTDVPMM  120
IQMEDKDHTM ENGVDDGLQL VHLLLACAEA VGCRDTKLAE TLLSQIWYSA NLLGDSLQRV  180
SYCFATGLKS RLSLLQTNMN ANGTIWGGVT LPTDVTSEEK IEAFHLLHQN TPYIEFGFMS  240
ANDAIVQACR KKDRLHIIDL GMEHTLQWPS LIKTLASTSN QEVPSKFIRI TGILGDHGDM  300
RELESSMDTV AAEANSLGIR LEFHLIAGPA TAEMLTKDNL HLKEDETLFV NSILHLHTYV  360
KESRGSLKTI LQSIKKLGPT LLTVVEQDAN HNGPFFLGRF LESLHYYSAI FDSLEACMGR  420
NSMERLKIER NHFAEEIRNI VAYEGPERIE RHERADQWRR QLGRAGFQVV AGNKDRQANV  480
MKGLRCGDGY TVGNDQKGYA LLGWKGRPIM LAAAWQPTSS A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.14e-67GRAS family protein