PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc009935.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 789aa MW: 90557.2 Da PI: 8.1475

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc009935.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	24.2	1.1e-07	45	126	7	90
FAR1 7 AkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 A++ GF ++k ++k+ g ++ +f+Cs +g++++e + ++ +r++++ +++C +l k k + w + HnH+++ Cse_sc009935.1_g010.1 45 AQSNGFLIVKGRTKTD--RGYKYSIEFKCSVHGTSAREGLE-DELERQTSTAKINCPFRLLAKYIKcRTGWILRVKCPRHNHDFV 126 8899*****98888..6667************999.8888899999**********99999999999***986 PP

Sequence ? help Back to Top
Protein Sequence Length: 789 aa Download sequence
MLETCALRKQ KTPLGLSWDC LPRLSSGLRV FGTEVALTDW VQSTAQSNGF LIVKGRTKTD 60 RGYKYSIEFK CSVHGTSARE GLEDELERQT STAKINCPFR LLAKYIKCRT GWILRVKCPR 120 HNHDFVDSFH GFSQAMQLKE RYFNNWLQHY DRMFVSYIID HYHSFGQTTT CRVEGQQALL 180 KLYLGSTQSS LDTLLCSVDK IIAAQETAIR DSLNTSKIKK LHSCKGTLFN ELRYNVSRDA 240 LLLILAESKR DLFYGLPCYH ELYYLQIHGS LIPLNVVDNF WRTLSVPCPR VRHTHTSEEP 300 QEPEEPQGPE EPQGPEEPEY FSCQDDVEKF QNVFTKASSF VKKNMLNMLR GIYAPEFVST 360 QQPAVKESTR GRPSAKDKKS KAKQNIPDLN KEPPTGHRRS YTKPKKVRDL NEETVRHSSY 420 VGEPSNVPDL NEEPSEGDLR QYLYIPNDSS EYFMARIPPL FRRWILGIVN VEGDRNCGYR 480 ALVVGLGHPE QIWPRIRTIF REEVDNNREV YMQMWGRVWF TTMVNSLNWF ESGPAPYGYW 540 MIMPDTGVAI ATALNRPIVC ISNSQSVTCL PLRDGPDTTQ LLSPVVILRV GEDQAAHYVH 600 AISAPAPVLP YLLLQESDDI QWRDIHCVNN TPARVESPDY VPSSPSYVPP SPAISPAADE 660 ENFIHRPPMQ QENPFLCRCR REFIIERTSQ KPKTCGLKDY ACPLSKPETE YYGCRYFMWK 720 EVFQQKYFGQ ASSSTQCSNC ETKDNTINML LAQNNLFKAR IKTLEASLKL ARNPVDIKRS 780 TCYWLKTIC

Sequence ? help Back to Top

Protein Sequence Length: 789 aa Download sequence

MLETCALRKQ KTPLGLSWDC LPRLSSGLRV FGTEVALTDW VQSTAQSNGF LIVKGRTKTD  60
RGYKYSIEFK CSVHGTSARE GLEDELERQT STAKINCPFR LLAKYIKCRT GWILRVKCPR  120
HNHDFVDSFH GFSQAMQLKE RYFNNWLQHY DRMFVSYIID HYHSFGQTTT CRVEGQQALL  180
KLYLGSTQSS LDTLLCSVDK IIAAQETAIR DSLNTSKIKK LHSCKGTLFN ELRYNVSRDA  240
LLLILAESKR DLFYGLPCYH ELYYLQIHGS LIPLNVVDNF WRTLSVPCPR VRHTHTSEEP  300
QEPEEPQGPE EPQGPEEPEY FSCQDDVEKF QNVFTKASSF VKKNMLNMLR GIYAPEFVST  360
QQPAVKESTR GRPSAKDKKS KAKQNIPDLN KEPPTGHRRS YTKPKKVRDL NEETVRHSSY  420
VGEPSNVPDL NEEPSEGDLR QYLYIPNDSS EYFMARIPPL FRRWILGIVN VEGDRNCGYR  480
ALVVGLGHPE QIWPRIRTIF REEVDNNREV YMQMWGRVWF TTMVNSLNWF ESGPAPYGYW  540
MIMPDTGVAI ATALNRPIVC ISNSQSVTCL PLRDGPDTTQ LLSPVVILRV GEDQAAHYVH  600
AISAPAPVLP YLLLQESDDI QWRDIHCVNN TPARVESPDY VPSSPSYVPP SPAISPAADE  660
ENFIHRPPMQ QENPFLCRCR REFIIERTSQ KPKTCGLKDY ACPLSKPETE YYGCRYFMWK  720
EVFQQKYFGQ ASSSTQCSNC ETKDNTINML LAQNNLFKAR IKTLEASLKL ARNPVDIKRS  780
TCYWLKTIC