PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc009917.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

bHLH

Protein Properties

Length: 277aa MW: 31036.1 Da PI: 7.5293

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc009917.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	15.1	4.3e-05	131	165	18	55
HHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 18 safeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ++f+eL e+l + +s K +K iL A++ I +L+ Cse_sc009917.1_g030.1 131 NRFQELNEILDPG---RSAKTDKTVILADAIRMITHLR 165 58********8...9*****************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 277 aa Download sequence
MEENNENNNF FDFSLIDHFP VPGGDLPSLE PGFHWSDNSF PGSTSVVSKG FSDSYGKSDA 60 SHATKEDESR KRAHPGSCSG TKACREKKRR DKLNERHAFS FYVLFVLSML VNIYFPISGK 120 SNVFNCDCCL NRFQELNEIL DPGRSAKTDK TVILADAIRM ITHLRNEATT LKDSSQDLLV 180 KINELKVEKN ELRDEKQKLK TDKERLEQQL KSTFCGPPTA FYPPAHPVIP VPCPGPTPVG 240 GNKFMPYMGF QGVPMWQFAP PAAVDTSKDH VHRSPLA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	70	90	RKRAHPGSCSGTKACREKKRR
2	87	92	KKRRDK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G54680.1	4e-57	bHLH family protein