PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc009852.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MYB

Protein Properties

Length: 377aa MW: 41717.3 Da PI: 5.1233

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc009852.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55	1.9e-17	61	106	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd ll+++v +G+++W++Iar + gR++k+c++rw + Cse_sc009852.1_g010.1 61 KGPWSPEEDSLLAKLVFNFGPRNWSLIARGVS-GRSGKSCRLRWCNQ 106 79****************************.*********985 PP
2	Myb_DNA-binding	55.2	1.7e-17	113	157	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r+++T eE+ +++ a++ +G++ W++Iar ++ gRt++ +k++w++ Cse_sc009852.1_g010.1 113 RKPFTHEEERIILSAHAIHGNK-WAAIARLLP-GRTDNAIKNHWNST 157 789*****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 377 aa Download sequence
MEKYGCEEEK EKEVVVTTND EDEEEEDDDD ESEEEANDNN NIKKNDEKKK ITKYVIGGVK 60 KGPWSPEEDS LLAKLVFNFG PRNWSLIARG VSGRSGKSCR LRWCNQLDPA LKRKPFTHEE 120 ERIILSAHAI HGNKWAAIAR LLPGRTDNAI KNHWNSTLRR RGVGFGRFNI GSGNTMDEAA 180 TASIDRSKAS SEETLSCGDV NSFKCVDGVD VTSDHYVENS QLNSDPPTLF RPKPRVSAFN 240 VYNSQDSSET QEPLIQSSKA DIGISKLLEG ERLVPHQCGY GCCGISTLSN SKKSLLGPEF 300 VDYAEPPCFP SHELAALATD ISNIAWLRSG LENNSVKPTD SVIPKTNNDH LENKNVLPMP 360 VRWQPSTAQP ANVGSLS

Sequence ? help Back to Top

Protein Sequence Length: 377 aa Download sequence

MEKYGCEEEK EKEVVVTTND EDEEEEDDDD ESEEEANDNN NIKKNDEKKK ITKYVIGGVK  60
KGPWSPEEDS LLAKLVFNFG PRNWSLIARG VSGRSGKSCR LRWCNQLDPA LKRKPFTHEE  120
ERIILSAHAI HGNKWAAIAR LLPGRTDNAI KNHWNSTLRR RGVGFGRFNI GSGNTMDEAA  180
TASIDRSKAS SEETLSCGDV NSFKCVDGVD VTSDHYVENS QLNSDPPTLF RPKPRVSAFN  240
VYNSQDSSET QEPLIQSSKA DIGISKLLEG ERLVPHQCGY GCCGISTLSN SKKSLLGPEF  300
VDYAEPPCFP SHELAALATD ISNIAWLRSG LENNSVKPTD SVIPKTNNDH LENKNVLPMP  360
VRWQPSTAQP ANVGSLS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G09230.1	3e-95	MYB family protein