PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc009835.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

SBP

Protein Properties

Length: 282aa MW: 30896.6 Da PI: 10.2285

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc009835.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	131.5	2.8e-41	29	105	2	78
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 C v+gC+adl +++eyhrrhkvCe+hsk+p+v+++g+ qrfCqqCsrfh+l efDe+krsCr+rL++hn+rrrk+qa Cse_sc009835.1_g030.1 29 CLVDGCTADLGQCREYHRRHKVCEIHSKTPKVTIAGRDQRFCQQCSRFHSLAEFDEGKRSCRKRLDGHNRRRRKPQA 105 **************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 282 aa Download sequence
MDLSSSAKRA KTPASSTGGS NNISIIVSCL VDGCTADLGQ CREYHRRHKV CEIHSKTPKV 60 TIAGRDQRFC QQCSRFHSLA EFDEGKRSCR KRLDGHNRRR RKPQADSLSK TTTPFLSNQQ 120 GIARILSFNS PQIPLSSMVG SSRPSGFKSE IPGPISPFSN QPPLNYLTRH PMNQGPSPPT 180 PTARNDGENH FNFLQQRPPP LSGTTHALSL LSSSPQAHQT QGIMPSVPSG IGQYGFAQEM 240 HSEAMLTESS GMTLQFQGMF NNDHAGSSSS GIKQQTLSFR WD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	86	103	KRSCRKRLDGHNRRRRKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50670.1	2e-44	SBP family protein