PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc009817.1_g030.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | bHLH | ||||||||
Protein Properties | Length: 226aa MW: 25256.1 Da PI: 7.6982 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 26.6 | 1.1e-08 | 119 | 159 | 9 | 54 |
HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r RR+ri +++ L++l+P +K++ a++L +Av+Y+k L Cse_sc009817.1_g030.1 119 ARHRRERISERIRILQRLVPGG-----TKMDTASMLDEAVHYMKFL 159 699*****************87.....8****************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 226 aa Download sequence |
MDMMTMMMDL DKLPDPFSIP FQDLSDSSIM DLNFSSENST TNHNGPSSLM YPTQDHLAIP 60 PSHFPRASWL HQKPDSVEAM REMIFRMAAL QPVQIDPEAV KPPKRRNVKI SKDPQSVAAR 120 HRRERISERI RILQRLVPGG TKMDTASMLD EAVHYMKFLK KQVETLEQAA VPSTAVCSIM 180 TTTGMNSTVA GLCPTNMNHH GGNNNYMIRA CGESAGHMVG SMELLK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G67060.1 | 5e-40 | bHLH family protein |