PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc009794.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 742aa MW: 85790.7 Da PI: 9.7219

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc009794.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	42.3	2.5e-13	143	238	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtkle 82 +Y++Y + GF+++ s+++k+ r+g + ++ ++C++egk ++ + + ++k r+r+ tg a++k+ ++ +gk+++ k++ Cse_sc009794.1_g020.1 143 MYKAYVVRGGFEIKLSSQRKT-RSGFVQHKYLMCNREGKLKNINIDtlksqgNDKPIRNRNLRVTGFMARVKLDLDPvSGKYKLVKFN 229 8*************99998.8899*********9987777788887888889************************** PP FAR1 83 leHnHelap 91 HnH+l+p Cse_sc009794.1_g020.1 230 PRHNHTLCP 238 *****96 PP

Sequence ? help Back to Top
Protein Sequence Length: 742 aa Download sequence
MDNIGEIIYI QVVEGSAGSV CDAEQNESIE LGSVSSVGTV VDSVEQNQNV EGGVRIVEEG 60 ILAMNDVGDV ERLRFIVEDD LRSGETDDEN ETHVNEAVTT PKASLVIHKE TPWGSVYWQP 120 NMEPELIPKE GAYFDTLDDA IRMYKAYVVR GGFEIKLSSQ RKTRSGFVQH KYLMCNREGK 180 LKNINIDTLK SQGNDKPIRN RNLRVTGFMA RVKLDLDPVS GKYKLVKFNP RHNHTLCPEV 240 YQHLSKTKRK MVYSEKLFVM KAKTANIGAT VAHYIYSSIE RICKKIYDET DFKRRFNEIV 300 WDIFLEPRGF EEKWGKLIED FGLKDRKWLT KMFNMRSAWI PAYFLDSPLF GLMRTTSRSE 360 SENSFFSHFT NEGSKLIKFM ICFESAMEKQ RHIQEQLDFD SMDLMPKLKT KLMIEKHATL 420 VYTRTIFLRV QTEINAGIWD YQIQNVQTEE GCEITLIRDK NAGEYRTLYK KKKKGTSEAV 480 EKPKATHIQA MYKALPSIWF ICRHIFCVFK NNDIEKIPER NILRRWTRDI IPPDLKRKRK 540 RYGEKNETID RHANGATCLV DNCLHRLSND EGKMAEFVEH IRTLKKKVHL AVPKPPRKKD 600 DMEKFIGVPK PKVIRVNNPS GAKNKGGTRK VSLKGKITTF EVEQTQVHEL PCFLMIKTIE 660 VLLLMISFFL QRSVVPLKGK ITTFEVEQAQ VHELLCFLII KATEVFLLMI PFFLVRSVVL 720 KTLVKDVSSV KTKILVKGIY RL

Sequence ? help Back to Top

Protein Sequence Length: 742 aa Download sequence

MDNIGEIIYI QVVEGSAGSV CDAEQNESIE LGSVSSVGTV VDSVEQNQNV EGGVRIVEEG  60
ILAMNDVGDV ERLRFIVEDD LRSGETDDEN ETHVNEAVTT PKASLVIHKE TPWGSVYWQP  120
NMEPELIPKE GAYFDTLDDA IRMYKAYVVR GGFEIKLSSQ RKTRSGFVQH KYLMCNREGK  180
LKNINIDTLK SQGNDKPIRN RNLRVTGFMA RVKLDLDPVS GKYKLVKFNP RHNHTLCPEV  240
YQHLSKTKRK MVYSEKLFVM KAKTANIGAT VAHYIYSSIE RICKKIYDET DFKRRFNEIV  300
WDIFLEPRGF EEKWGKLIED FGLKDRKWLT KMFNMRSAWI PAYFLDSPLF GLMRTTSRSE  360
SENSFFSHFT NEGSKLIKFM ICFESAMEKQ RHIQEQLDFD SMDLMPKLKT KLMIEKHATL  420
VYTRTIFLRV QTEINAGIWD YQIQNVQTEE GCEITLIRDK NAGEYRTLYK KKKKGTSEAV  480
EKPKATHIQA MYKALPSIWF ICRHIFCVFK NNDIEKIPER NILRRWTRDI IPPDLKRKRK  540
RYGEKNETID RHANGATCLV DNCLHRLSND EGKMAEFVEH IRTLKKKVHL AVPKPPRKKD  600
DMEKFIGVPK PKVIRVNNPS GAKNKGGTRK VSLKGKITTF EVEQTQVHEL PCFLMIKTIE  660
VLLLMISFFL QRSVVPLKGK ITTFEVEQAQ VHELLCFLII KATEVFLLMI PFFLVRSVVL  720
KTLVKDVSSV KTKILVKGIY RL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-25	FAR1 family protein