PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc009780.1_g030.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | FAR1 | ||||||||
Protein Properties | Length: 203aa MW: 23256.4 Da PI: 10.4072 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 68.4 | 1.7e-21 | 78 | 185 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk....................tekerrtraetrtgCkaklkv 68 kfY+eYA+e GF+vr+ ++++k+n+ + + f+Cs+eg + + +++ ++ +rr+ra++r+gCka l++ Cse_sc009780.1_g030.1 78 KFYKEYAREGGFEVRRGGQSNRKKNK--ILKYFCCSREGVKPSPNDDiskkdksktdtpssdiaevvKVIKRRKRASQRCGCKALLRL 163 6****************999987777..8889*******999988889999**************99999****************** PP FAR1 69 kkekdgkwevtkleleHnHela 90 +++ ++k++v+++ ++HnH+l+ Cse_sc009780.1_g030.1 164 RQTPENKFVVYTFFEKHNHSLV 185 ********************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 203 aa Download sequence |
MKTINPHQTT YSTYSKLPSE PSTPRSTNIV QDNVVDAESV TQVGSYQPTP PGSKFWIPGA 60 KNKPVEGTQF DTIEQALKFY KEYAREGGFE VRRGGQSNRK KNKILKYFCC SREGVKPSPN 120 DDISKKDKSK TDTPSSDIAE VVKVIKRRKR ASQRCGCKAL LRLRQTPENK FVVYTFFEKH 180 NHSLVHENDY RYLRAARKLT FSK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G10240.1 | 7e-12 | FAR1 family protein |