PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc009775.1_g050.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | MYB_related | ||||||||
Protein Properties | Length: 229aa MW: 25917.4 Da PI: 9.0696 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 23.1 | 1.6e-07 | 41 | 87 | 1 | 53 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkY 53 k+r +Wt+e H++F+ea++ +A P +i e+m+ k t +++SH Qk+ Cse_sc009775.1_g050.1 41 KQREKWTHEEHKKFLEALKLY---GRAWP-QIEEHMGNK--TAIQIRSHAQKF 87 79****************988...48999.7******98..8999*******9 PP | |||||||
2 | Myb_DNA-binding | 48.3 | 2.3e-15 | 43 | 87 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r +WT eE++++++a k++G W I ++mg ++t+ q++s+ qk+ Cse_sc009775.1_g050.1 43 REKWTHEEHKKFLEALKLYGRA-WPQIEEHMG-NKTAIQIRSHAQKF 87 789*****************88.*********.************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 229 aa Download sequence |
MVEDQSEGFK SNTGTKNQID DQFTPCEDYA LKSRKPYKIT KQREKWTHEE HKKFLEALKL 60 YGRAWPQIEE HMGNKTAIQI RSHAQKFFSK VVRQSSDIDG TKVDHIEIPP PRAKRKPAHP 120 YPRNVYIPSK KGHLTVVPTS CSEESNHENT SPDSPDQYAS IQSLKLFGKT VFVMDSARPS 180 SPDTVTPLSL NLMLSQEPEC PTTPILSSDG IFGKMGDKYA KGFLAYKTC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G17300.1 | 4e-38 | MYB_related family protein |