PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc009758.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 307aa    MW: 34535.8 Da    PI: 5.1871
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc009758.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.26.2e-1678126153
                    AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkl 53 
                            ++y+GVr++k +g+++AeIr p       +r++lg+f taeeA ka+++ ++++
  Cse_sc009758.1_g020.1  78 KKYRGVRQRK-WGKFAAEIRNPF----EgRRVWLGTFSTAEEASKAYENKKLEF 126
                            59*******9.**********64....35******************9988775 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MRTVRITLHD PDMTDDEANK KPKSKIVQEV KIPMVKLSDT YGSFQYSNNR GINLGKKRRV  60
LTRTSSQPQM TVLSNGVKKY RGVRQRKWGK FAAEIRNPFE GRRVWLGTFS TAEEASKAYE  120
NKKLEFDRMA VSLTGCVRRN IQKKNKRKSI DVGSSDRKKQ AVSEESVGVI PHSSPSSVLE  180
TQSSLVSRIF ENNELKIESC STSKNAIDEE LLPDIGFMDP VDDEMTLGEI GKDLDFGSEL  240
GPLFLDSFGL FDGFGNADDF NLSGFDENLS SDLPDWGLGE LNNEELDWIN KTLKLDEPPT  300
GEQPQQQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.11e-23ERF family protein