PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc009709.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 484aa MW: 55383.3 Da PI: 8.1252

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc009709.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	27	1.5e-08	18	99	7	90
FAR1 7 AkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 A+++GF ++k ++k+ g ++ +f Csk+g++++e + ++ +r++++ +++C +l k k + w ++ HnH+++ Cse_sc009709.1_g030.1 18 AESIGFLIVKGRTKTD--RGYKYSIEFLCSKHGTSAREGLE-DELERQTSTAKINCPFRLLAKFIKgRTGWILKVKCPRHNHDFV 99 899******98888..6667************999.8888899999*********988999999999***986 PP

Sequence ? help Back to Top
Protein Sequence Length: 484 aa Download sequence
MKVFGTEVAL TDWVQSTAES IGFLIVKGRT KTDRGYKYSI EFLCSKHGTS AREGLEDELE 60 RQTSTAKINC PFRLLAKFIK GRTGWILKVK CPRHNHDFVD SFYGFSQAMR LKESELVLVK 120 QLTKQHVAPR IILSSLKESD PNNVSGIKTV YNAQDKIRRA SRGDLTPIQL LLVHLQRQGV 180 LRYFRNWLRH YDRIFGHTTT CRVESQHALL KLHLGSTQSS LDTLLCSVDK IIAAQKTAIR 240 ASLNTSKIKK LHACKGTLFN ELRYNVSRDV LLLILAESKR DVDPHECGHQ LRLIYGIPCY 300 HELYYLQANG LPIPLGFVDN FWRTLSTPWP VVRNTQEPDE TEYPEEHQGP EEPEYFSCQD 360 DVQKFQSPAP YGYWMTMPET GVAIATALNH PIPGTEEYGC RYFMWKEIFQ QKYFGQASSS 420 TQCSNCETKD KTINMLLAQN NLLKARIKTL EASLELARNP VDHACQSSEI LYELIDDINN 480 LNVE

Sequence ? help Back to Top

Protein Sequence Length: 484 aa Download sequence

MKVFGTEVAL TDWVQSTAES IGFLIVKGRT KTDRGYKYSI EFLCSKHGTS AREGLEDELE  60
RQTSTAKINC PFRLLAKFIK GRTGWILKVK CPRHNHDFVD SFYGFSQAMR LKESELVLVK  120
QLTKQHVAPR IILSSLKESD PNNVSGIKTV YNAQDKIRRA SRGDLTPIQL LLVHLQRQGV  180
LRYFRNWLRH YDRIFGHTTT CRVESQHALL KLHLGSTQSS LDTLLCSVDK IIAAQKTAIR  240
ASLNTSKIKK LHACKGTLFN ELRYNVSRDV LLLILAESKR DVDPHECGHQ LRLIYGIPCY  300
HELYYLQANG LPIPLGFVDN FWRTLSTPWP VVRNTQEPDE TEYPEEHQGP EEPEYFSCQD  360
DVQKFQSPAP YGYWMTMPET GVAIATALNH PIPGTEEYGC RYFMWKEIFQ QKYFGQASSS  420
TQCSNCETKD KTINMLLAQN NLLKARIKTL EASLELARNP VDHACQSSEI LYELIDDINN  480
LNVE