PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc009700.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 731aa MW: 84127.4 Da PI: 8.4781

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc009700.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	52.7	1.4e-16	112	205	3	90
FAR1 3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtklel 83 Y +YA+++GF vrks +k+ r+g ++++ +vC++eg ++ + ++k++r+++ + tgCka+++ ++ + + k+++t +++ Cse_sc009700.1_g010.1 112 YMKYASKAGFVVRKSCQKRL-RSGIVKQKYLVCNREGCPNGIYVDtldlenSDKQKRSSNLHITGCKARVMFELIHgSTKYKLTVFDS 198 99**********998887.8898********999877777888878899999999***********9******* PP FAR1 84 eHnHela 90 HnHel Cse_sc009700.1_g010.1 199 IHNHELE 205 ***96 PP

Sequence ? help Back to Top
Protein Sequence Length: 731 aa Download sequence
MDSIPNSLVS SDRSSSITEN VVVSITESAT EDIVVSDDVS AKYTEEIVAY EHGDESAAIK 60 KLNALKTPES FSTHSNFDTP GGTVYYIPKV PVDVLLAKGN VFNSVDECIS AYMKYASKAG 120 FVVRKSCQKR LRSGIVKQKY LVCNREGCPN GIYVDTLDLE NSDKQKRSSN LHITGCKARV 180 MFELIHGSTK YKLTVFDSIH NHELERKEYK NLSKTERQLT YAEQLFIVKA ASVNIGATRA 240 HHLLTGLKGS YLLVQGTTVD FKNFFRSVNC YIGDSDAQML IAKMENRQKH VPDFSFDYLV 300 ENAELSAIFW ADEVSKYNYK EFCDVVSFDA TYRTNKYKMM FVPFTAIDNH RKCVTVAAGL 360 LKNETANSYI WLLKAFIKAF GKAPSIVVTD QDGAMRKAIE FAGSKHILCM WHITQKLPGK 420 ICSKIYDHTD FKRKFNQIVW NMYIGPDEFE YQWGKLLDEF NLHNHKWLTK MFRIRSCWIP 480 AFFVDSPLCG LMRTTSRSKS ENSLFSHFTN SGSTLMNFMN CFEMAMEKQR HMQERLDHKS 540 IDSVPTLRTY LKIERHASKV YTRPLFELVQ AEIFAGTWFC KIDTKSLVEG SEVSVIKEKK 600 FVDELMEKKK AKKKEKFKKK GDDNDKNEEE EEPINLFHRE DGLYKNANVE MIPNQYILRR 660 WTKNLIPAGL RNKRNMYGEK NEIVENYAND ATSIVDHCVH MWSKDETRLA DFIEKLKLLK 720 LDVEADCPNR P

Sequence ? help Back to Top

Protein Sequence Length: 731 aa Download sequence

MDSIPNSLVS SDRSSSITEN VVVSITESAT EDIVVSDDVS AKYTEEIVAY EHGDESAAIK  60
KLNALKTPES FSTHSNFDTP GGTVYYIPKV PVDVLLAKGN VFNSVDECIS AYMKYASKAG  120
FVVRKSCQKR LRSGIVKQKY LVCNREGCPN GIYVDTLDLE NSDKQKRSSN LHITGCKARV  180
MFELIHGSTK YKLTVFDSIH NHELERKEYK NLSKTERQLT YAEQLFIVKA ASVNIGATRA  240
HHLLTGLKGS YLLVQGTTVD FKNFFRSVNC YIGDSDAQML IAKMENRQKH VPDFSFDYLV  300
ENAELSAIFW ADEVSKYNYK EFCDVVSFDA TYRTNKYKMM FVPFTAIDNH RKCVTVAAGL  360
LKNETANSYI WLLKAFIKAF GKAPSIVVTD QDGAMRKAIE FAGSKHILCM WHITQKLPGK  420
ICSKIYDHTD FKRKFNQIVW NMYIGPDEFE YQWGKLLDEF NLHNHKWLTK MFRIRSCWIP  480
AFFVDSPLCG LMRTTSRSKS ENSLFSHFTN SGSTLMNFMN CFEMAMEKQR HMQERLDHKS  540
IDSVPTLRTY LKIERHASKV YTRPLFELVQ AEIFAGTWFC KIDTKSLVEG SEVSVIKEKK  600
FVDELMEKKK AKKKEKFKKK GDDNDKNEEE EEPINLFHRE DGLYKNANVE MIPNQYILRR  660
WTKNLIPAGL RNKRNMYGEK NEIVENYAND ATSIVDHCVH MWSKDETRLA DFIEKLKLLK  720
LDVEADCPNR P

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	2e-65	FAR1 family protein