PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc009679.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 420aa MW: 48098.2 Da PI: 9.1499

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc009679.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	21.7	6.7e-07	18	105	7	90
FAR1 7 AkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.......dgkwevtkleleHnH 87 A++ GF ++k ++k+ g ++ +f+Cs++g++++e + ++ +r++ + +++C +l k k ++ w + l HnH Cse_sc009679.1_g030.1 18 AQSNGFLIVKGRTKTD--RGYKYSIEFKCSRHGTSAREGLE-DELERQTGTAKINCPFRLLAKYIKgrtgttkTSGWILRVKCLRHNH 102 8899*****98888..6667************999.8888889999***98887654434333455777777799* PP FAR1 88 ela 90 +++ Cse_sc009679.1_g030.1 103 DFV 105 986 PP

Sequence ? help Back to Top
Protein Sequence Length: 420 aa Download sequence
MKVFGTEVAL TDWVQSTAQS NGFLIVKGRT KTDRGYKYSI EFKCSRHGTS AREGLEDELE 60 RQTGTAKINC PFRLLAKYIK GRTGTTKTSG WILRVKCLRH NHDFVDSFHG FSQVMRLKES 120 ELVLVEQLTK YQVVPRIILS SLKESDLNNV SSIKTVYNAQ NKIRSAIHGD LTPIQLLLVY 180 LRRKGYTYYP RISAPAPVLP HLLLQEPDDI QWKDIHCVNN TPARVESPDY VPSSPSYVPP 240 SPAISPAADE ENFIHRPPVL PHLLLQPSRV DKYEREIAGL RRRISELEFR MQQENPFLCR 300 CRRGFIIERT SHKPKTCGLK YYACPLSKPG TVDYGCRYFM WKEVFQQKYF GQASSSTQCS 360 NCETKDKTIN MLLAQNNLLK ARIKTLEASL ELARNPVDHA CQSSEILYEL IDDINNLHVE

Sequence ? help Back to Top

Protein Sequence Length: 420 aa Download sequence

MKVFGTEVAL TDWVQSTAQS NGFLIVKGRT KTDRGYKYSI EFKCSRHGTS AREGLEDELE  60
RQTGTAKINC PFRLLAKYIK GRTGTTKTSG WILRVKCLRH NHDFVDSFHG FSQVMRLKES  120
ELVLVEQLTK YQVVPRIILS SLKESDLNNV SSIKTVYNAQ NKIRSAIHGD LTPIQLLLVY  180
LRRKGYTYYP RISAPAPVLP HLLLQEPDDI QWKDIHCVNN TPARVESPDY VPSSPSYVPP  240
SPAISPAADE ENFIHRPPVL PHLLLQPSRV DKYEREIAGL RRRISELEFR MQQENPFLCR  300
CRRGFIIERT SHKPKTCGLK YYACPLSKPG TVDYGCRYFM WKEVFQQKYF GQASSSTQCS  360
NCETKDKTIN MLLAQNNLLK ARIKTLEASL ELARNPVDHA CQSSEILYEL IDDINNLHVE