PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc009583.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family GATA
Protein Properties Length: 330aa    MW: 37136.2 Da    PI: 6.3429
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc009583.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA56.24.6e-18225259135
                   GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                            C +C t kTp+WR gp g+ktLCnaCG++y++ +l
  Cse_sc009583.1_g010.1 225 CLHCATDKTPQWRTGPLGPKTLCNACGVRYKSGRL 259
                            99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
METPEFFNAS SFSPEKRHSD VKTEHFIIDD LLNFPNDDTE SYDDVGDVFN AGTSTDSSNI  60
TTALESCNSS GEGGRGGLPN TQFSHDLCVP YDDMAELEWL SNFEEESFST EDMEKLQLIS  120
GFKAHGVSET RQYHHETDNR SNNPIFNTDM TVPGKARTKR SRAAPCNWAS RLLHLSQPTM  180
IPVVTMSSES ESDIVSSSIG KKTVKAPSKK KEVYDNESNG DGRRCLHCAT DKTPQWRTGP  240
LGPKTLCNAC GVRYKSGRLV PEYRPAASPT FVLTKHSNSH RKVLELRRQK EMQSAHQQPF  300
FHHPNMMFDV SKGDDYLIHQ HLGPDYRQLI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25830.17e-99GATA family protein